Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 AC010240.3-201ENST00000607688 395 ntBASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL3Q8IVW4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 AL512604.3-201ENST00000569583 964 ntBASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 OR6D1P-202ENST00000641007 5290 ntBASIC18.79■□□□□ 0.6
CDKL3Q8IVW4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 HMGA1P5-201ENST00000412453 271 ntBASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 AC009947.2-201ENST00000444014 672 ntBASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 FAM87A-204ENST00000613235 858 ntBASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CDKL3Q8IVW4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms