Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
RNF135Q8IUD6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF135Q8IUD6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF135Q8IUD6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF135Q8IUD6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF135Q8IUD6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF135Q8IUD6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF135Q8IUD6 MIR564-202ENST00000385049 94 ntBASIC19.36■□□□□ 0.69
RNF135Q8IUD6 RPL13AP23-201ENST00000480739 586 ntBASIC19.36■□□□□ 0.69
RNF135Q8IUD6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF135Q8IUD6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF135Q8IUD6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RNF135Q8IUD6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF135Q8IUD6 AL020996.1-203ENST00000536896 2307 ntBASIC19.36■□□□□ 0.69
RNF135Q8IUD6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF135Q8IUD6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF135Q8IUD6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RNF135Q8IUD6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF135Q8IUD6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF135Q8IUD6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 BX323043.1-201ENST00000641006 1765 ntBASIC19.34■□□□□ 0.69
RNF135Q8IUD6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 PMS2P2-201ENST00000425039 1128 ntBASIC19.34■□□□□ 0.69
RNF135Q8IUD6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 AC055717.3-201ENST00000622967 595 ntBASIC19.34■□□□□ 0.69
RNF135Q8IUD6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 AC004408.2-201ENST00000623613 2777 ntBASIC19.34■□□□□ 0.69
RNF135Q8IUD6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF135Q8IUD6 ZNF259P1-201ENST00000407656 1365 ntBASIC19.33■□□□□ 0.69
RNF135Q8IUD6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.33■□□□□ 0.69
RNF135Q8IUD6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF135Q8IUD6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.33■□□□□ 0.69
RNF135Q8IUD6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
RNF135Q8IUD6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.33■□□□□ 0.69
RNF135Q8IUD6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF135Q8IUD6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
RNF135Q8IUD6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF135Q8IUD6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF135Q8IUD6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RNF135Q8IUD6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.33■□□□□ 0.68
RNF135Q8IUD6 AC124864.1-201ENST00000623408 392 ntBASIC19.33■□□□□ 0.68
RNF135Q8IUD6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF135Q8IUD6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF135Q8IUD6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF135Q8IUD6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF135Q8IUD6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RNF135Q8IUD6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms