Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD1LQ86WJ1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
CHD1LQ86WJ1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC22.6■■□□□ 1.21
CHD1LQ86WJ1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD1LQ86WJ1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD1LQ86WJ1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD1LQ86WJ1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC22.6■■□□□ 1.21
CHD1LQ86WJ1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD1LQ86WJ1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD1LQ86WJ1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD1LQ86WJ1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CHD1LQ86WJ1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHD1LQ86WJ1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CHD1LQ86WJ1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHD1LQ86WJ1 HLA-DQB1-201ENST00000374943 1656 ntBASIC22.59■■□□□ 1.21
CHD1LQ86WJ1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHD1LQ86WJ1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC22.59■■□□□ 1.21
CHD1LQ86WJ1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHD1LQ86WJ1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC22.59■■□□□ 1.21
CHD1LQ86WJ1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC22.59■■□□□ 1.21
CHD1LQ86WJ1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC22.59■■□□□ 1.21
CHD1LQ86WJ1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC22.59■■□□□ 1.21
CHD1LQ86WJ1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CHD1LQ86WJ1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
CHD1LQ86WJ1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHD1LQ86WJ1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CHD1LQ86WJ1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHD1LQ86WJ1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
CHD1LQ86WJ1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CHD1LQ86WJ1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CHD1LQ86WJ1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
CHD1LQ86WJ1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CHD1LQ86WJ1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CHD1LQ86WJ1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC22.58■■□□□ 1.21
CHD1LQ86WJ1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CHD1LQ86WJ1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC22.58■■□□□ 1.21
CHD1LQ86WJ1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC22.58■■□□□ 1.21
CHD1LQ86WJ1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.58■■□□□ 1.21
CHD1LQ86WJ1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC22.58■■□□□ 1.21
CHD1LQ86WJ1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC22.58■■□□□ 1.21
CHD1LQ86WJ1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC22.58■■□□□ 1.21
CHD1LQ86WJ1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC22.58■■□□□ 1.21
CHD1LQ86WJ1 AC066615.1-201ENST00000640911 628 ntBASIC22.58■■□□□ 1.21
CHD1LQ86WJ1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
CHD1LQ86WJ1 LINC01568-207ENST00000641790 1380 ntBASIC22.58■■□□□ 1.21
CHD1LQ86WJ1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CHD1LQ86WJ1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
CHD1LQ86WJ1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.2
CHD1LQ86WJ1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 NEK4P2-201ENST00000580004 1012 ntBASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 GNAS-203ENST00000306120 1878 ntBASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CHD1LQ86WJ1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 AL512604.3-201ENST00000569583 964 ntBASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CHD1LQ86WJ1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms