Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.36■□□□□ 0.05
CSMD2Q7Z408 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.36■□□□□ 0.05
CSMD2Q7Z408 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 MEIS3P1-201ENST00000495167 958 ntBASIC15.35■□□□□ 0.05
CSMD2Q7Z408 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 C20orf181-201ENST00000623918 480 ntBASIC15.35■□□□□ 0.05
CSMD2Q7Z408 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 AC112777.1-201ENST00000540175 1423 ntBASIC15.35■□□□□ 0.05
CSMD2Q7Z408 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.35■□□□□ 0.05
CSMD2Q7Z408 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 MIR4745-201ENST00000577608 62 ntBASIC15.35■□□□□ 0.05
CSMD2Q7Z408 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSMD2Q7Z408 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 PRSS29P-201ENST00000440800 595 ntBASIC15.34■□□□□ 0.05
CSMD2Q7Z408 GAPDHP21-201ENST00000450301 1010 ntBASIC15.34■□□□□ 0.05
CSMD2Q7Z408 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 IRX1P1-201ENST00000438849 1838 ntBASIC15.34■□□□□ 0.05
CSMD2Q7Z408 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 LAGE3P1-201ENST00000425356 484 ntBASIC15.34■□□□□ 0.05
CSMD2Q7Z408 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 NKAPP1-205ENST00000585790 367 ntBASIC15.34■□□□□ 0.05
CSMD2Q7Z408 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CSMD2Q7Z408 TCF3P1-201ENST00000423021 1937 ntBASIC15.33■□□□□ 0.05
CSMD2Q7Z408 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.33■□□□□ 0.05
CSMD2Q7Z408 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.33■□□□□ 0.05
CSMD2Q7Z408 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CSMD2Q7Z408 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CSMD2Q7Z408 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CSMD2Q7Z408 AC092474.2-201ENST00000424288 719 ntBASIC15.33■□□□□ 0.05
CSMD2Q7Z408 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.33■□□□□ 0.05
CSMD2Q7Z408 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.33■□□□□ 0.05
CSMD2Q7Z408 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.33■□□□□ 0.05
CSMD2Q7Z408 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CSMD2Q7Z408 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CSMD2Q7Z408 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.33■□□□□ 0.04
CSMD2Q7Z408 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.33■□□□□ 0.04
CSMD2Q7Z408 KRT8P50-201ENST00000562022 1438 ntBASIC15.33■□□□□ 0.04
CSMD2Q7Z408 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CSMD2Q7Z408 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.33■□□□□ 0.04
CSMD2Q7Z408 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSMD2Q7Z408 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSMD2Q7Z408 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSMD2Q7Z408 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.33■□□□□ 0.04
CSMD2Q7Z408 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.33■□□□□ 0.04
CSMD2Q7Z408 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSMD2Q7Z408 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSMD2Q7Z408 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSMD2Q7Z408 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
CSMD2Q7Z408 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSMD2Q7Z408 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
CSMD2Q7Z408 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSMD2Q7Z408 MKNK2P1-201ENST00000437526 628 ntBASIC15.33■□□□□ 0.04
CSMD2Q7Z408 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSMD2Q7Z408 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.33■□□□□ 0.04
CSMD2Q7Z408 AC105339.3-201ENST00000560043 636 ntBASIC15.33■□□□□ 0.04
CSMD2Q7Z408 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.33■□□□□ 0.04
CSMD2Q7Z408 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CSMD2Q7Z408 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD2Q7Z408 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms