Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 UPK3BP1-201ENST00000428678 509 ntBASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 KRT18P41-201ENST00000518924 1277 ntBASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 HLA-F-220ENST00000434407 884 ntBASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 AC116407.4-201ENST00000623319 1061 ntBASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.05■□□□□ 0.64
RFWD3Q6PCD5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 ANO7L1-203ENST00000602586 1720 ntBASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 AC020916.1-201ENST00000587762 1774 ntBASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RFWD3Q6PCD5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.03■□□□□ 0.64
RFWD3Q6PCD5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFWD3Q6PCD5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFWD3Q6PCD5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFWD3Q6PCD5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RFWD3Q6PCD5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RFWD3Q6PCD5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFWD3Q6PCD5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFWD3Q6PCD5 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFWD3Q6PCD5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFWD3Q6PCD5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFWD3Q6PCD5 AL645929.1-201ENST00000420084 975 ntBASIC19.03■□□□□ 0.64
RFWD3Q6PCD5 MIR3180-4-201ENST00000582223 153 ntBASIC19.03■□□□□ 0.64
RFWD3Q6PCD5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.03■□□□□ 0.64
RFWD3Q6PCD5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RFWD3Q6PCD5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFWD3Q6PCD5 AL163051.1-201ENST00000569214 1512 ntBASIC19.03■□□□□ 0.64
RFWD3Q6PCD5 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFWD3Q6PCD5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFWD3Q6PCD5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RFWD3Q6PCD5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms