Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 FITM1-202ENST00000559294 800 ntBASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 AC009053.2-201ENST00000563701 2365 ntBASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 SLC25A1P4-201ENST00000567977 778 ntBASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.89■□□□□ 0.13
ATPAF1Q5TC12 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 CA15P1-201ENST00000481698 905 ntBASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ATPAF1Q5TC12 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ATPAF1Q5TC12 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms