Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LONRF3Q496Y0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.8■□□□□ 0.92
LONRF3Q496Y0 AC022616.7-201ENST00000525383 220 ntBASIC20.8■□□□□ 0.92
LONRF3Q496Y0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
LONRF3Q496Y0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LONRF3Q496Y0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
LONRF3Q496Y0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.8■□□□□ 0.92
LONRF3Q496Y0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.8■□□□□ 0.92
LONRF3Q496Y0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LONRF3Q496Y0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.8■□□□□ 0.92
LONRF3Q496Y0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LONRF3Q496Y0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 AP000593.1-201ENST00000393668 712 ntBASIC20.79■□□□□ 0.92
LONRF3Q496Y0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 AC011558.1-201ENST00000623459 338 ntBASIC20.79■□□□□ 0.92
LONRF3Q496Y0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
LONRF3Q496Y0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 COX11P1-201ENST00000489116 835 ntBASIC20.78■□□□□ 0.92
LONRF3Q496Y0 AC063952.2-201ENST00000498792 1227 ntBASIC20.78■□□□□ 0.92
LONRF3Q496Y0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 MIR3180-5-201ENST00000583743 153 ntBASIC20.78■□□□□ 0.92
LONRF3Q496Y0 AL023973.1-201ENST00000624619 620 ntBASIC20.78■□□□□ 0.92
LONRF3Q496Y0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LONRF3Q496Y0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 AC138028.4-201ENST00000564984 1845 ntBASIC20.77■□□□□ 0.92
LONRF3Q496Y0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LONRF3Q496Y0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
LONRF3Q496Y0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.77■□□□□ 0.91
LONRF3Q496Y0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.77■□□□□ 0.91
LONRF3Q496Y0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LONRF3Q496Y0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.77■□□□□ 0.91
LONRF3Q496Y0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LONRF3Q496Y0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms