Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TSR1Q2NL82 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TSR1Q2NL82 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.07■□□□□ 0.8
TSR1Q2NL82 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.07■□□□□ 0.8
TSR1Q2NL82 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.07■□□□□ 0.8
TSR1Q2NL82 AC233263.1-201ENST00000578059 224 ntBASIC20.07■□□□□ 0.8
TSR1Q2NL82 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
TSR1Q2NL82 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.07■□□□□ 0.8
TSR1Q2NL82 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TSR1Q2NL82 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.07■□□□□ 0.8
TSR1Q2NL82 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TSR1Q2NL82 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TSR1Q2NL82 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSR1Q2NL82 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSR1Q2NL82 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSR1Q2NL82 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSR1Q2NL82 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TSR1Q2NL82 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSR1Q2NL82 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSR1Q2NL82 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSR1Q2NL82 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSR1Q2NL82 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSR1Q2NL82 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.06■□□□□ 0.8
TSR1Q2NL82 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TSR1Q2NL82 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.06■□□□□ 0.8
TSR1Q2NL82 KRT18P41-201ENST00000518924 1277 ntBASIC20.06■□□□□ 0.8
TSR1Q2NL82 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.06■□□□□ 0.8
TSR1Q2NL82 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TSR1Q2NL82 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.06■□□□□ 0.8
TSR1Q2NL82 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.06■□□□□ 0.8
TSR1Q2NL82 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TSR1Q2NL82 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSR1Q2NL82 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
TSR1Q2NL82 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.06■□□□□ 0.8
TSR1Q2NL82 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.06■□□□□ 0.8
TSR1Q2NL82 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TSR1Q2NL82 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.06■□□□□ 0.8
TSR1Q2NL82 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TSR1Q2NL82 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSR1Q2NL82 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSR1Q2NL82 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSR1Q2NL82 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSR1Q2NL82 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.05■□□□□ 0.8
TSR1Q2NL82 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSR1Q2NL82 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TSR1Q2NL82 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSR1Q2NL82 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.05■□□□□ 0.8
TSR1Q2NL82 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TSR1Q2NL82 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSR1Q2NL82 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSR1Q2NL82 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSR1Q2NL82 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSR1Q2NL82 AP000593.1-201ENST00000393668 712 ntBASIC20.05■□□□□ 0.8
TSR1Q2NL82 AC133681.1-201ENST00000465482 601 ntBASIC20.05■□□□□ 0.8
TSR1Q2NL82 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSR1Q2NL82 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.05■□□□□ 0.8
TSR1Q2NL82 CKBP1-201ENST00000565489 1086 ntBASIC20.05■□□□□ 0.8
TSR1Q2NL82 AC124016.1-201ENST00000609552 612 ntBASIC20.05■□□□□ 0.8
TSR1Q2NL82 AL353708.3-201ENST00000610272 989 ntBASIC20.05■□□□□ 0.8
TSR1Q2NL82 AC011298.2-201ENST00000617989 482 ntBASIC20.05■□□□□ 0.8
TSR1Q2NL82 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TSR1Q2NL82 AL109659.2-201ENST00000606809 1674 ntBASIC20.05■□□□□ 0.8
TSR1Q2NL82 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.05■□□□□ 0.8
TSR1Q2NL82 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.05■□□□□ 0.8
TSR1Q2NL82 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TSR1Q2NL82 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TSR1Q2NL82 FLJ13224-201ENST00000313737 1514 ntBASIC20.05■□□□□ 0.8
TSR1Q2NL82 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSR1Q2NL82 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TSR1Q2NL82 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSR1Q2NL82 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.05■□□□□ 0.8
TSR1Q2NL82 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSR1Q2NL82 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSR1Q2NL82 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TSR1Q2NL82 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSR1Q2NL82 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.05■□□□□ 0.8
TSR1Q2NL82 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSR1Q2NL82 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSR1Q2NL82 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSR1Q2NL82 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
TSR1Q2NL82 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TSR1Q2NL82 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSR1Q2NL82 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TSR1Q2NL82 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSR1Q2NL82 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSR1Q2NL82 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSR1Q2NL82 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TSR1Q2NL82 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.04■□□□□ 0.8
TSR1Q2NL82 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TSR1Q2NL82 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TSR1Q2NL82 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSR1Q2NL82 AL031985.4-201ENST00000642138 673 ntBASIC20.04■□□□□ 0.8
TSR1Q2NL82 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSR1Q2NL82 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSR1Q2NL82 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.04■□□□□ 0.8
TSR1Q2NL82 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSR1Q2NL82 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSR1Q2NL82 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSR1Q2NL82 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TSR1Q2NL82 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms