Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CL1P78423 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CL1P78423 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CL1P78423 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CX3CL1P78423 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.75□□□□□ -0.05
CX3CL1P78423 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CX3CL1P78423 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CL1P78423 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CL1P78423 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CL1P78423 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CL1P78423 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CL1P78423 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CL1P78423 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CL1P78423 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CL1P78423 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CL1P78423 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.74□□□□□ -0.05
CX3CL1P78423 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CX3CL1P78423 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CL1P78423 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CX3CL1P78423 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.74□□□□□ -0.05
CX3CL1P78423 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CL1P78423 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CL1P78423 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.74□□□□□ -0.05
CX3CL1P78423 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
CX3CL1P78423 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.74□□□□□ -0.05
CX3CL1P78423 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.74□□□□□ -0.05
CX3CL1P78423 KRT18P41-201ENST00000518924 1277 ntBASIC14.74□□□□□ -0.05
CX3CL1P78423 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CX3CL1P78423 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.74□□□□□ -0.05
CX3CL1P78423 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.74□□□□□ -0.05
CX3CL1P78423 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.74□□□□□ -0.05
CX3CL1P78423 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CL1P78423 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CX3CL1P78423 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CL1P78423 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CL1P78423 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CL1P78423 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CL1P78423 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CL1P78423 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.74□□□□□ -0.05
CX3CL1P78423 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CL1P78423 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CL1P78423 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CX3CL1P78423 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CX3CL1P78423 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
CX3CL1P78423 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.74□□□□□ -0.05
CX3CL1P78423 AC126763.1-201ENST00000552015 2118 ntBASIC14.74□□□□□ -0.05
CX3CL1P78423 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CL1P78423 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CL1P78423 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CX3CL1P78423 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
CX3CL1P78423 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.73□□□□□ -0.05
CX3CL1P78423 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.73□□□□□ -0.05
CX3CL1P78423 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CL1P78423 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
CX3CL1P78423 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
CX3CL1P78423 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CL1P78423 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CL1P78423 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.73□□□□□ -0.05
CX3CL1P78423 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.73□□□□□ -0.05
CX3CL1P78423 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CL1P78423 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.73□□□□□ -0.05
CX3CL1P78423 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CX3CL1P78423 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CL1P78423 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.73□□□□□ -0.05
CX3CL1P78423 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.73□□□□□ -0.05
CX3CL1P78423 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CL1P78423 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.73□□□□□ -0.05
CX3CL1P78423 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CX3CL1P78423 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CL1P78423 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CL1P78423 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CL1P78423 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CL1P78423 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CL1P78423 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CL1P78423 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.73□□□□□ -0.05
CX3CL1P78423 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CL1P78423 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CL1P78423 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CX3CL1P78423 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.73□□□□□ -0.05
CX3CL1P78423 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.73□□□□□ -0.05
CX3CL1P78423 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CX3CL1P78423 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CX3CL1P78423 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CL1P78423 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CL1P78423 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.72□□□□□ -0.05
CX3CL1P78423 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CL1P78423 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.72□□□□□ -0.05
CX3CL1P78423 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CL1P78423 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CL1P78423 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CL1P78423 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CL1P78423 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CX3CL1P78423 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CL1P78423 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CL1P78423 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CL1P78423 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.72□□□□□ -0.05
CX3CL1P78423 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CX3CL1P78423 AP000593.1-201ENST00000393668 712 ntBASIC14.72□□□□□ -0.05
CX3CL1P78423 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.72□□□□□ -0.05
CX3CL1P78423 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms