Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEP78395 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.45■□□□□ 0.54
PRAMEP78395 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
PRAMEP78395 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.45■□□□□ 0.54
PRAMEP78395 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEP78395 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.45■□□□□ 0.54
PRAMEP78395 AC112497.1-201ENST00000624824 639 ntBASIC18.45■□□□□ 0.54
PRAMEP78395 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.45■□□□□ 0.54
PRAMEP78395 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEP78395 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEP78395 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEP78395 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEP78395 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEP78395 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PRAMEP78395 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.45■□□□□ 0.54
PRAMEP78395 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEP78395 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.45■□□□□ 0.54
PRAMEP78395 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.45■□□□□ 0.54
PRAMEP78395 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEP78395 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
PRAMEP78395 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEP78395 LINC01568-207ENST00000641790 1380 ntBASIC18.44■□□□□ 0.54
PRAMEP78395 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEP78395 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
PRAMEP78395 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEP78395 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PRAMEP78395 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.44■□□□□ 0.54
PRAMEP78395 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEP78395 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEP78395 AC009065.1-201ENST00000564055 1225 ntBASIC18.44■□□□□ 0.54
PRAMEP78395 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.44■□□□□ 0.54
PRAMEP78395 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.44■□□□□ 0.54
PRAMEP78395 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.44■□□□□ 0.54
PRAMEP78395 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.44■□□□□ 0.54
PRAMEP78395 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.44■□□□□ 0.54
PRAMEP78395 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.44■□□□□ 0.54
PRAMEP78395 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PRAMEP78395 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEP78395 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEP78395 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.44■□□□□ 0.54
PRAMEP78395 AC009102.3-201ENST00000623118 1491 ntBASIC18.44■□□□□ 0.54
PRAMEP78395 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEP78395 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEP78395 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRAMEP78395 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PRAMEP78395 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.44■□□□□ 0.54
PRAMEP78395 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEP78395 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEP78395 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEP78395 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEP78395 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.43■□□□□ 0.54
PRAMEP78395 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEP78395 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PRAMEP78395 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PRAMEP78395 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
PRAMEP78395 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEP78395 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.43■□□□□ 0.54
PRAMEP78395 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.43■□□□□ 0.54
PRAMEP78395 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.43■□□□□ 0.54
PRAMEP78395 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.43■□□□□ 0.54
PRAMEP78395 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEP78395 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEP78395 FAM87A-204ENST00000613235 858 ntBASIC18.43■□□□□ 0.54
PRAMEP78395 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.43■□□□□ 0.54
PRAMEP78395 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PRAMEP78395 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEP78395 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEP78395 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEP78395 AL133373.2-201ENST00000623187 2828 ntBASIC18.43■□□□□ 0.54
PRAMEP78395 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.43■□□□□ 0.54
PRAMEP78395 KRT18P22-201ENST00000402024 1347 ntBASIC18.43■□□□□ 0.54
PRAMEP78395 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRAMEP78395 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.43■□□□□ 0.54
PRAMEP78395 GMCL1P1-201ENST00000463439 1581 ntBASIC18.42■□□□□ 0.54
PRAMEP78395 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.42■□□□□ 0.54
PRAMEP78395 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEP78395 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEP78395 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PRAMEP78395 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.42■□□□□ 0.54
PRAMEP78395 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PRAMEP78395 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEP78395 ESPNP-201ENST00000270691 2015 ntBASIC18.42■□□□□ 0.54
PRAMEP78395 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEP78395 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
PRAMEP78395 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEP78395 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEP78395 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEP78395 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEP78395 MIR149-201ENST00000384879 89 ntBASIC18.42■□□□□ 0.54
PRAMEP78395 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
PRAMEP78395 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEP78395 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.42■□□□□ 0.54
PRAMEP78395 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.42■□□□□ 0.54
PRAMEP78395 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.42■□□□□ 0.54
PRAMEP78395 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.42■□□□□ 0.54
PRAMEP78395 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEP78395 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.42■□□□□ 0.54
PRAMEP78395 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRAMEP78395 PCDHB18P-201ENST00000524813 2368 ntBASIC18.42■□□□□ 0.54
PRAMEP78395 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms