Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.82□□□□□ -0.36
CKS1BP61024 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CKS1BP61024 AC090164.3-201ENST00000610780 2143 ntBASIC12.82□□□□□ -0.36
CKS1BP61024 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CKS1BP61024 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CKS1BP61024 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 CRK-204ENST00000574295 1391 ntTSL 5 BASIC12.81□□□□□ -0.36
CKS1BP61024 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CKS1BP61024 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CKS1BP61024 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC12.81□□□□□ -0.36
CKS1BP61024 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC12.81□□□□□ -0.36
CKS1BP61024 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CKS1BP61024 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC12.81□□□□□ -0.36
CKS1BP61024 AC006015.1-201ENST00000429970 570 ntBASIC12.81□□□□□ -0.36
CKS1BP61024 AC093787.1-201ENST00000450396 207 ntBASIC12.81□□□□□ -0.36
CKS1BP61024 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC12.81□□□□□ -0.36
CKS1BP61024 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
CKS1BP61024 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CKS1BP61024 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC12.81□□□□□ -0.36
CKS1BP61024 ANKRD18DP-204ENST00000455355 1975 ntBASIC12.81□□□□□ -0.36
CKS1BP61024 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CKS1BP61024 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CKS1BP61024 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 AC023824.1-201ENST00000562945 2975 ntBASIC12.81□□□□□ -0.36
CKS1BP61024 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CKS1BP61024 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CKS1BP61024 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CKS1BP61024 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CKS1BP61024 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC12.8□□□□□ -0.36
CKS1BP61024 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CKS1BP61024 FP475955.4-201ENST00000623131 1990 ntBASIC12.8□□□□□ -0.36
CKS1BP61024 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CKS1BP61024 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CKS1BP61024 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 WIZP1-201ENST00000531444 2299 ntBASIC12.8□□□□□ -0.36
CKS1BP61024 AP006587.1-201ENST00000534129 1502 ntBASIC12.8□□□□□ -0.36
CKS1BP61024 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 MFF-205ENST00000354503 1085 ntTSL 2 BASIC12.8□□□□□ -0.36
CKS1BP61024 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 GGT1-206ENST00000404223 952 ntTSL 2 BASIC12.8□□□□□ -0.36
CKS1BP61024 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC12.8□□□□□ -0.36
CKS1BP61024 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC12.8□□□□□ -0.36
CKS1BP61024 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC12.8□□□□□ -0.36
CKS1BP61024 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC12.8□□□□□ -0.36
CKS1BP61024 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CKS1BP61024 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC12.8□□□□□ -0.36
CKS1BP61024 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC12.8□□□□□ -0.36
CKS1BP61024 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CKS1BP61024 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CKS1BP61024 AL354751.1-201ENST00000412768 1863 ntBASIC12.8□□□□□ -0.36
CKS1BP61024 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CKS1BP61024 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC12.8□□□□□ -0.36
CKS1BP61024 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
CKS1BP61024 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.8□□□□□ -0.36
CKS1BP61024 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.8□□□□□ -0.36
CKS1BP61024 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC12.8□□□□□ -0.36
CKS1BP61024 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS1BP61024 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CKS1BP61024 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CKS1BP61024 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CKS1BP61024 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms