Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.62□□□□□ -0.23
CMC4P56277 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CMC4P56277 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMC4P56277 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CMC4P56277 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMC4P56277 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CMC4P56277 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CMC4P56277 AL162741.1-201ENST00000565563 1558 ntBASIC13.62□□□□□ -0.23
CMC4P56277 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMC4P56277 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMC4P56277 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.61□□□□□ -0.23
CMC4P56277 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC13.61□□□□□ -0.23
CMC4P56277 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CMC4P56277 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CMC4P56277 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
CMC4P56277 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC13.61□□□□□ -0.23
CMC4P56277 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CMC4P56277 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CMC4P56277 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.61□□□□□ -0.23
CMC4P56277 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.61□□□□□ -0.23
CMC4P56277 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.61□□□□□ -0.23
CMC4P56277 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.61□□□□□ -0.23
CMC4P56277 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.61□□□□□ -0.23
CMC4P56277 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.61□□□□□ -0.23
CMC4P56277 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.61□□□□□ -0.23
CMC4P56277 AC091076.1-201ENST00000610741 619 ntBASIC13.61□□□□□ -0.23
CMC4P56277 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CMC4P56277 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.61□□□□□ -0.23
CMC4P56277 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.61□□□□□ -0.23
CMC4P56277 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CMC4P56277 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.61□□□□□ -0.23
CMC4P56277 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMC4P56277 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.6□□□□□ -0.23
CMC4P56277 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.6□□□□□ -0.23
CMC4P56277 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
CMC4P56277 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.6□□□□□ -0.23
CMC4P56277 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
CMC4P56277 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.6□□□□□ -0.23
CMC4P56277 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CMC4P56277 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.6□□□□□ -0.23
CMC4P56277 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.6□□□□□ -0.23
CMC4P56277 SDHAP2-201ENST00000455183 2001 ntBASIC13.6□□□□□ -0.23
CMC4P56277 VENTXP5-201ENST00000523979 775 ntBASIC13.6□□□□□ -0.23
CMC4P56277 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC13.6□□□□□ -0.23
CMC4P56277 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.6□□□□□ -0.23
CMC4P56277 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.6□□□□□ -0.23
CMC4P56277 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CMC4P56277 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CMC4P56277 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMC4P56277 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CMC4P56277 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.6□□□□□ -0.23
CMC4P56277 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms