Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH12P55289 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH12P55289 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.06■□□□□ 0.32
CDH12P55289 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH12P55289 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH12P55289 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH12P55289 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CDH12P55289 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH12P55289 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH12P55289 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH12P55289 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CDH12P55289 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH12P55289 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH12P55289 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH12P55289 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.06■□□□□ 0.32
CDH12P55289 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH12P55289 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.06■□□□□ 0.32
CDH12P55289 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH12P55289 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.06■□□□□ 0.32
CDH12P55289 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CDH12P55289 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH12P55289 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH12P55289 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH12P55289 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH12P55289 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH12P55289 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CDH12P55289 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH12P55289 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH12P55289 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CDH12P55289 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH12P55289 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH12P55289 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CDH12P55289 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH12P55289 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CDH12P55289 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH12P55289 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH12P55289 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDH12P55289 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH12P55289 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH12P55289 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CDH12P55289 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH12P55289 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CDH12P55289 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CDH12P55289 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH12P55289 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH12P55289 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH12P55289 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDH12P55289 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH12P55289 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CDH12P55289 RPS2P55-201ENST00000397318 883 ntBASIC17.05■□□□□ 0.32
CDH12P55289 GCSHP5-201ENST00000443090 522 ntBASIC17.05■□□□□ 0.32
CDH12P55289 UBE2SP1-201ENST00000450587 669 ntBASIC17.05■□□□□ 0.32
CDH12P55289 AC107956.1-201ENST00000494359 873 ntBASIC17.05■□□□□ 0.32
CDH12P55289 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH12P55289 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.05■□□□□ 0.32
CDH12P55289 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH12P55289 AC012313.1-201ENST00000593393 3059 ntBASIC17.05■□□□□ 0.32
CDH12P55289 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CDH12P55289 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH12P55289 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH12P55289 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH12P55289 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH12P55289 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH12P55289 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH12P55289 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDH12P55289 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH12P55289 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH12P55289 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDH12P55289 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH12P55289 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH12P55289 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH12P55289 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH12P55289 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDH12P55289 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH12P55289 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH12P55289 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH12P55289 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH12P55289 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CDH12P55289 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH12P55289 AC116562.2-201ENST00000507042 360 ntBASIC17.04■□□□□ 0.32
CDH12P55289 NUDT16P1-203ENST00000513809 620 ntBASIC17.04■□□□□ 0.32
CDH12P55289 AC008622.2-201ENST00000617006 1229 ntBASIC17.04■□□□□ 0.32
CDH12P55289 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH12P55289 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH12P55289 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH12P55289 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH12P55289 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH12P55289 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH12P55289 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH12P55289 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDH12P55289 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH12P55289 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH12P55289 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH12P55289 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CDH12P55289 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms