Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
PDE1AP54750 AIRN-201ENST00000601203 4374 ntBASIC22.33■■□□□ 1.17
PDE1AP54750 FLJ13224-201ENST00000313737 1514 ntBASIC22.33■■□□□ 1.17
PDE1AP54750 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC22.33■■□□□ 1.17
PDE1AP54750 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
PDE1AP54750 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDE1AP54750 PPOX-219ENST00000544598 813 ntTSL 2 BASIC22.33■■□□□ 1.17
PDE1AP54750 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC22.33■■□□□ 1.17
PDE1AP54750 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.33■■□□□ 1.17
PDE1AP54750 AC006011.2-201ENST00000621313 1158 ntBASIC22.33■■□□□ 1.17
PDE1AP54750 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.33■■□□□ 1.17
PDE1AP54750 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDE1AP54750 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDE1AP54750 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PDE1AP54750 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PDE1AP54750 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.16
PDE1AP54750 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
PDE1AP54750 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PDE1AP54750 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PDE1AP54750 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PDE1AP54750 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
PDE1AP54750 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDE1AP54750 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC22.32■■□□□ 1.16
PDE1AP54750 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDE1AP54750 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDE1AP54750 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDE1AP54750 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC22.32■■□□□ 1.16
PDE1AP54750 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PDE1AP54750 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDE1AP54750 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC22.32■■□□□ 1.16
PDE1AP54750 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PDE1AP54750 SPDYE15P-201ENST00000424157 909 ntBASIC22.32■■□□□ 1.16
PDE1AP54750 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDE1AP54750 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDE1AP54750 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC22.32■■□□□ 1.16
PDE1AP54750 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
PDE1AP54750 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC22.32■■□□□ 1.16
PDE1AP54750 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.32■■□□□ 1.16
PDE1AP54750 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC22.32■■□□□ 1.16
PDE1AP54750 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PDE1AP54750 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PDE1AP54750 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC22.32■■□□□ 1.16
PDE1AP54750 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC22.32■■□□□ 1.16
PDE1AP54750 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDE1AP54750 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDE1AP54750 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
PDE1AP54750 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC22.32■■□□□ 1.16
PDE1AP54750 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDE1AP54750 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDE1AP54750 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDE1AP54750 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC22.31■■□□□ 1.16
PDE1AP54750 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDE1AP54750 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDE1AP54750 STK4-201ENST00000372801 2038 ntTSL 2 BASIC22.31■■□□□ 1.16
PDE1AP54750 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC22.31■■□□□ 1.16
PDE1AP54750 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDE1AP54750 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PDE1AP54750 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDE1AP54750 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
PDE1AP54750 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PDE1AP54750 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDE1AP54750 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
PDE1AP54750 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC22.31■■□□□ 1.16
PDE1AP54750 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDE1AP54750 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
PDE1AP54750 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PDE1AP54750 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PDE1AP54750 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.31■■□□□ 1.16
PDE1AP54750 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC22.31■■□□□ 1.16
PDE1AP54750 AC034232.1-201ENST00000506026 1064 ntBASIC22.31■■□□□ 1.16
PDE1AP54750 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.31■■□□□ 1.16
PDE1AP54750 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PDE1AP54750 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDE1AP54750 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PDE1AP54750 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDE1AP54750 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PDE1AP54750 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDE1AP54750 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
PDE1AP54750 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDE1AP54750 NARF-204ENST00000390006 1766 ntTSL 2 BASIC22.3■■□□□ 1.16
PDE1AP54750 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDE1AP54750 AC067852.2-201ENST00000590513 2313 ntBASIC22.3■■□□□ 1.16
PDE1AP54750 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PDE1AP54750 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PDE1AP54750 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDE1AP54750 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDE1AP54750 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC22.3■■□□□ 1.16
PDE1AP54750 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PDE1AP54750 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.3■■□□□ 1.16
PDE1AP54750 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC22.3■■□□□ 1.16
PDE1AP54750 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDE1AP54750 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
PDE1AP54750 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC22.3■■□□□ 1.16
PDE1AP54750 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC22.3■■□□□ 1.16
PDE1AP54750 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDE1AP54750 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PDE1AP54750 AC132938.6-201ENST00000623828 1655 ntBASIC22.3■■□□□ 1.16
PDE1AP54750 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDE1AP54750 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDE1AP54750 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms