Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 HYMAI.1-201ENST00000620949 238 ntBASIC19.55■□□□□ 0.72
RAD23BP54727 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAD23BP54727 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAD23BP54727 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
RAD23BP54727 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAD23BP54727 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAD23BP54727 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.55■□□□□ 0.72
RAD23BP54727 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.54■□□□□ 0.72
RAD23BP54727 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAD23BP54727 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAD23BP54727 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.54■□□□□ 0.72
RAD23BP54727 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.54■□□□□ 0.72
RAD23BP54727 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAD23BP54727 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.54■□□□□ 0.72
RAD23BP54727 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.54■□□□□ 0.72
RAD23BP54727 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RAD23BP54727 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RAD23BP54727 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAD23BP54727 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RAD23BP54727 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAD23BP54727 ESPNP-201ENST00000270691 2015 ntBASIC19.54■□□□□ 0.72
RAD23BP54727 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAD23BP54727 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAD23BP54727 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.54■□□□□ 0.72
RAD23BP54727 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.54■□□□□ 0.72
RAD23BP54727 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAD23BP54727 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAD23BP54727 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
RAD23BP54727 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAD23BP54727 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAD23BP54727 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAD23BP54727 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAD23BP54727 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAD23BP54727 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.53■□□□□ 0.72
RAD23BP54727 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RAD23BP54727 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAD23BP54727 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.53■□□□□ 0.72
RAD23BP54727 AL391807.1-203ENST00000604392 2365 ntBASIC19.53■□□□□ 0.72
RAD23BP54727 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
RAD23BP54727 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAD23BP54727 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.53■□□□□ 0.72
RAD23BP54727 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAD23BP54727 AC112907.2-201ENST00000448639 330 ntBASIC19.53■□□□□ 0.72
RAD23BP54727 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.53■□□□□ 0.72
RAD23BP54727 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.53■□□□□ 0.72
RAD23BP54727 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RAD23BP54727 AL024508.2-201ENST00000607749 1894 ntBASIC19.53■□□□□ 0.72
RAD23BP54727 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAD23BP54727 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.53■□□□□ 0.72
RAD23BP54727 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RAD23BP54727 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAD23BP54727 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAD23BP54727 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAD23BP54727 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAD23BP54727 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RAD23BP54727 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAD23BP54727 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAD23BP54727 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.53■□□□□ 0.72
RAD23BP54727 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
RAD23BP54727 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.52■□□□□ 0.72
RAD23BP54727 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RAD23BP54727 LINC01126-201ENST00000623515 1646 ntBASIC19.52■□□□□ 0.72
RAD23BP54727 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.52■□□□□ 0.72
RAD23BP54727 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAD23BP54727 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAD23BP54727 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.52■□□□□ 0.72
RAD23BP54727 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.52■□□□□ 0.72
RAD23BP54727 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.52■□□□□ 0.72
RAD23BP54727 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAD23BP54727 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAD23BP54727 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RAD23BP54727 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.52■□□□□ 0.71
RAD23BP54727 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAD23BP54727 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAD23BP54727 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAD23BP54727 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAD23BP54727 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAD23BP54727 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
RAD23BP54727 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAD23BP54727 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
RAD23BP54727 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAD23BP54727 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RAD23BP54727 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAD23BP54727 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAD23BP54727 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.51■□□□□ 0.71
RAD23BP54727 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAD23BP54727 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAD23BP54727 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
RAD23BP54727 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.51■□□□□ 0.71
RAD23BP54727 HBZP1-201ENST00000354915 429 ntBASIC19.51■□□□□ 0.71
RAD23BP54727 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAD23BP54727 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAD23BP54727 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.51■□□□□ 0.71
RAD23BP54727 HLA-F-220ENST00000434407 884 ntBASIC19.51■□□□□ 0.71
RAD23BP54727 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.51■□□□□ 0.71
RAD23BP54727 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.51■□□□□ 0.71
RAD23BP54727 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAD23BP54727 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RAD23BP54727 AL136038.4-201ENST00000603606 1261 ntBASIC19.51■□□□□ 0.71
RAD23BP54727 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms