Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.35■□□□□ 0.69
CACNA2D1P54289 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA2D1P54289 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.35■□□□□ 0.69
CACNA2D1P54289 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA2D1P54289 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA2D1P54289 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.35■□□□□ 0.69
CACNA2D1P54289 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.35■□□□□ 0.69
CACNA2D1P54289 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.35■□□□□ 0.69
CACNA2D1P54289 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA2D1P54289 NPAP1P7-201ENST00000613027 823 ntBASIC19.35■□□□□ 0.69
CACNA2D1P54289 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CACNA2D1P54289 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CACNA2D1P54289 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.35■□□□□ 0.69
CACNA2D1P54289 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA2D1P54289 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CACNA2D1P54289 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA2D1P54289 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA2D1P54289 AL024508.2-201ENST00000607749 1894 ntBASIC19.35■□□□□ 0.69
CACNA2D1P54289 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA2D1P54289 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.35■□□□□ 0.69
CACNA2D1P54289 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CACNA2D1P54289 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.34■□□□□ 0.69
CACNA2D1P54289 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA2D1P54289 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA2D1P54289 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA2D1P54289 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.34■□□□□ 0.69
CACNA2D1P54289 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.34■□□□□ 0.69
CACNA2D1P54289 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA2D1P54289 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA2D1P54289 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA2D1P54289 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA2D1P54289 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA2D1P54289 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA2D1P54289 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA2D1P54289 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.34■□□□□ 0.69
CACNA2D1P54289 AP002383.4-201ENST00000442518 975 ntBASIC19.34■□□□□ 0.69
CACNA2D1P54289 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CACNA2D1P54289 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.34■□□□□ 0.69
CACNA2D1P54289 AP003733.1-201ENST00000491725 852 ntBASIC19.34■□□□□ 0.69
CACNA2D1P54289 AC009065.1-201ENST00000564055 1225 ntBASIC19.34■□□□□ 0.69
CACNA2D1P54289 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.34■□□□□ 0.69
CACNA2D1P54289 AC005332.3-201ENST00000589904 676 ntBASIC19.34■□□□□ 0.69
CACNA2D1P54289 AC024563.2-201ENST00000603282 481 ntBASIC19.34■□□□□ 0.69
CACNA2D1P54289 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CACNA2D1P54289 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CACNA2D1P54289 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA2D1P54289 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA2D1P54289 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CACNA2D1P54289 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CACNA2D1P54289 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA2D1P54289 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.34■□□□□ 0.69
CACNA2D1P54289 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA2D1P54289 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA2D1P54289 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
CACNA2D1P54289 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA2D1P54289 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA2D1P54289 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.34■□□□□ 0.69
CACNA2D1P54289 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.33■□□□□ 0.69
CACNA2D1P54289 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CACNA2D1P54289 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CACNA2D1P54289 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CACNA2D1P54289 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CACNA2D1P54289 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.33■□□□□ 0.69
CACNA2D1P54289 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.33■□□□□ 0.68
CACNA2D1P54289 TSPY22P-201ENST00000427496 604 ntBASIC19.33■□□□□ 0.68
CACNA2D1P54289 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.33■□□□□ 0.68
CACNA2D1P54289 AL390719.2-201ENST00000606993 987 ntBASIC19.33■□□□□ 0.68
CACNA2D1P54289 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.33■□□□□ 0.68
CACNA2D1P54289 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CACNA2D1P54289 AC120498.9-201ENST00000339021 3867 ntBASIC19.33■□□□□ 0.68
CACNA2D1P54289 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CACNA2D1P54289 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CACNA2D1P54289 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.33■□□□□ 0.68
CACNA2D1P54289 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CACNA2D1P54289 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CACNA2D1P54289 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CACNA2D1P54289 LINC01126-201ENST00000623515 1646 ntBASIC19.33■□□□□ 0.68
CACNA2D1P54289 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA2D1P54289 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.32■□□□□ 0.68
CACNA2D1P54289 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CACNA2D1P54289 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA2D1P54289 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA2D1P54289 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.32■□□□□ 0.68
CACNA2D1P54289 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA2D1P54289 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CACNA2D1P54289 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA2D1P54289 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CACNA2D1P54289 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA2D1P54289 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.32■□□□□ 0.68
CACNA2D1P54289 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA2D1P54289 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA2D1P54289 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA2D1P54289 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CACNA2D1P54289 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA2D1P54289 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA2D1P54289 IGHGP-201ENST00000390555 1178 ntBASIC19.32■□□□□ 0.68
CACNA2D1P54289 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA2D1P54289 KRT18P48-201ENST00000434763 852 ntBASIC19.32■□□□□ 0.68
CACNA2D1P54289 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.32■□□□□ 0.68
CACNA2D1P54289 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms