Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK1P53667 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK1P53667 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK1P53667 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK1P53667 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
LIMK1P53667 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK1P53667 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK1P53667 AC104109.2-201ENST00000602919 1418 ntBASIC18.05■□□□□ 0.48
LIMK1P53667 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.05■□□□□ 0.48
LIMK1P53667 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK1P53667 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
LIMK1P53667 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK1P53667 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.05■□□□□ 0.48
LIMK1P53667 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK1P53667 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LIMK1P53667 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LIMK1P53667 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LIMK1P53667 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LIMK1P53667 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
LIMK1P53667 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LIMK1P53667 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LIMK1P53667 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LIMK1P53667 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LIMK1P53667 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LIMK1P53667 YBX2P1-201ENST00000394192 760 ntBASIC18.04■□□□□ 0.48
LIMK1P53667 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LIMK1P53667 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LIMK1P53667 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.04■□□□□ 0.48
LIMK1P53667 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LIMK1P53667 HNRNPDP1-201ENST00000439535 754 ntBASIC18.04■□□□□ 0.48
LIMK1P53667 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.04■□□□□ 0.48
LIMK1P53667 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.04■□□□□ 0.48
LIMK1P53667 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.04■□□□□ 0.48
LIMK1P53667 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
LIMK1P53667 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LIMK1P53667 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.04■□□□□ 0.48
LIMK1P53667 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LIMK1P53667 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.04■□□□□ 0.48
LIMK1P53667 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LIMK1P53667 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LIMK1P53667 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.04■□□□□ 0.48
LIMK1P53667 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.04■□□□□ 0.48
LIMK1P53667 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LIMK1P53667 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.03■□□□□ 0.48
LIMK1P53667 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LIMK1P53667 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LIMK1P53667 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LIMK1P53667 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
LIMK1P53667 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LIMK1P53667 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LIMK1P53667 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.03■□□□□ 0.48
LIMK1P53667 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.03■□□□□ 0.48
LIMK1P53667 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LIMK1P53667 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LIMK1P53667 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.03■□□□□ 0.48
LIMK1P53667 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LIMK1P53667 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LIMK1P53667 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.03■□□□□ 0.48
LIMK1P53667 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.03■□□□□ 0.48
LIMK1P53667 AC112482.1-201ENST00000492080 688 ntBASIC18.03■□□□□ 0.48
LIMK1P53667 AC096582.2-201ENST00000510860 516 ntBASIC18.03■□□□□ 0.48
LIMK1P53667 AC040169.1-201ENST00000565382 521 ntBASIC18.03■□□□□ 0.48
LIMK1P53667 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.03■□□□□ 0.48
LIMK1P53667 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.03■□□□□ 0.48
LIMK1P53667 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.03■□□□□ 0.48
LIMK1P53667 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LIMK1P53667 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
LIMK1P53667 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.03■□□□□ 0.48
LIMK1P53667 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LIMK1P53667 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LIMK1P53667 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LIMK1P53667 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LIMK1P53667 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.03■□□□□ 0.48
LIMK1P53667 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.03■□□□□ 0.48
LIMK1P53667 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.03■□□□□ 0.48
LIMK1P53667 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LIMK1P53667 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LIMK1P53667 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LIMK1P53667 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LIMK1P53667 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LIMK1P53667 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.02■□□□□ 0.48
LIMK1P53667 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LIMK1P53667 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.02■□□□□ 0.48
LIMK1P53667 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
LIMK1P53667 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
LIMK1P53667 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LIMK1P53667 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LIMK1P53667 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LIMK1P53667 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.02■□□□□ 0.48
LIMK1P53667 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LIMK1P53667 RPS8P6-201ENST00000426177 609 ntBASIC18.02■□□□□ 0.48
LIMK1P53667 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
LIMK1P53667 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LIMK1P53667 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LIMK1P53667 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.02■□□□□ 0.48
LIMK1P53667 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.02■□□□□ 0.48
LIMK1P53667 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
LIMK1P53667 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LIMK1P53667 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.02■□□□□ 0.48
LIMK1P53667 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms