Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUBP1P53384 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUBP1P53384 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NUBP1P53384 GK-202ENST00000378941 458 ntTSL 3 BASIC18.17■□□□□ 0.5
NUBP1P53384 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.17■□□□□ 0.5
NUBP1P53384 ZNF736P1Y-201ENST00000440402 1276 ntBASIC18.17■□□□□ 0.5
NUBP1P53384 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.17■□□□□ 0.5
NUBP1P53384 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.17■□□□□ 0.5
NUBP1P53384 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NUBP1P53384 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.17■□□□□ 0.5
NUBP1P53384 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NUBP1P53384 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUBP1P53384 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.17■□□□□ 0.5
NUBP1P53384 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.17■□□□□ 0.5
NUBP1P53384 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC18.17■□□□□ 0.5
NUBP1P53384 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUBP1P53384 AF228730.6-201ENST00000641497 218 ntBASIC18.17■□□□□ 0.5
NUBP1P53384 AC084121.3-201ENST00000641716 218 ntBASIC18.17■□□□□ 0.5
NUBP1P53384 AC105233.6-201ENST00000642093 218 ntBASIC18.17■□□□□ 0.5
NUBP1P53384 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUBP1P53384 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NUBP1P53384 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUBP1P53384 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.17■□□□□ 0.5
NUBP1P53384 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUBP1P53384 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.17■□□□□ 0.5
NUBP1P53384 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUBP1P53384 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUBP1P53384 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
NUBP1P53384 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NUBP1P53384 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.16■□□□□ 0.5
NUBP1P53384 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NUBP1P53384 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
NUBP1P53384 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUBP1P53384 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
NUBP1P53384 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.16■□□□□ 0.5
NUBP1P53384 AC073621.1-201ENST00000392730 636 ntBASIC18.16■□□□□ 0.5
NUBP1P53384 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.16■□□□□ 0.5
NUBP1P53384 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.16■□□□□ 0.5
NUBP1P53384 PRYP5-201ENST00000451909 266 ntBASIC18.16■□□□□ 0.5
NUBP1P53384 AC068205.1-201ENST00000526615 689 ntTSL 3 BASIC18.16■□□□□ 0.5
NUBP1P53384 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.16■□□□□ 0.5
NUBP1P53384 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.16■□□□□ 0.5
NUBP1P53384 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.16■□□□□ 0.5
NUBP1P53384 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.16■□□□□ 0.5
NUBP1P53384 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.16■□□□□ 0.5
NUBP1P53384 AC027612.4-201ENST00000605371 583 ntBASIC18.16■□□□□ 0.5
NUBP1P53384 AC093028.1-201ENST00000622998 982 ntBASIC18.16■□□□□ 0.5
NUBP1P53384 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUBP1P53384 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.16■□□□□ 0.5
NUBP1P53384 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.16■□□□□ 0.5
NUBP1P53384 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUBP1P53384 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUBP1P53384 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NUBP1P53384 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUBP1P53384 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NUBP1P53384 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NUBP1P53384 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.15■□□□□ 0.5
NUBP1P53384 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NUBP1P53384 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.15■□□□□ 0.5
NUBP1P53384 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NUBP1P53384 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NUBP1P53384 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
NUBP1P53384 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.15■□□□□ 0.5
NUBP1P53384 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
NUBP1P53384 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NUBP1P53384 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.15■□□□□ 0.5
NUBP1P53384 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.15■□□□□ 0.5
NUBP1P53384 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NUBP1P53384 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.15■□□□□ 0.5
NUBP1P53384 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC18.15■□□□□ 0.5
NUBP1P53384 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
NUBP1P53384 RNA5SP421-201ENST00000516864 134 ntBASIC18.15■□□□□ 0.5
NUBP1P53384 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
NUBP1P53384 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.15■□□□□ 0.5
NUBP1P53384 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.15■□□□□ 0.5
NUBP1P53384 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.15■□□□□ 0.5
NUBP1P53384 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.15■□□□□ 0.5
NUBP1P53384 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NUBP1P53384 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NUBP1P53384 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NUBP1P53384 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NUBP1P53384 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.14■□□□□ 0.5
NUBP1P53384 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NUBP1P53384 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
NUBP1P53384 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.14■□□□□ 0.5
NUBP1P53384 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.14■□□□□ 0.5
NUBP1P53384 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NUBP1P53384 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NUBP1P53384 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NUBP1P53384 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.14■□□□□ 0.49
NUBP1P53384 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.14■□□□□ 0.49
NUBP1P53384 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC18.14■□□□□ 0.49
NUBP1P53384 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NUBP1P53384 AC025678.2-201ENST00000562061 970 ntBASIC18.14■□□□□ 0.49
NUBP1P53384 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.14■□□□□ 0.49
NUBP1P53384 Z92544.3-201ENST00000624747 417 ntBASIC18.14■□□□□ 0.49
NUBP1P53384 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.14■□□□□ 0.49
NUBP1P53384 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NUBP1P53384 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NUBP1P53384 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms