Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 DUTP2-201ENST00000519164 463 ntBASIC16.7■□□□□ 0.26
HMGA2P52926 C1QBPP2-201ENST00000528754 825 ntBASIC16.7■□□□□ 0.26
HMGA2P52926 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.7■□□□□ 0.26
HMGA2P52926 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA2P52926 AC099343.3-201ENST00000605834 2503 ntBASIC16.7■□□□□ 0.26
HMGA2P52926 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA2P52926 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA2P52926 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HMGA2P52926 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA2P52926 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGA2P52926 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HMGA2P52926 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HMGA2P52926 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA2P52926 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA2P52926 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGA2P52926 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HMGA2P52926 AC080080.1-201ENST00000625121 2420 ntBASIC16.69■□□□□ 0.26
HMGA2P52926 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA2P52926 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA2P52926 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA2P52926 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA2P52926 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA2P52926 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA2P52926 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA2P52926 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA2P52926 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGA2P52926 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGA2P52926 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGA2P52926 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.69■□□□□ 0.26
HMGA2P52926 AC128676.1-201ENST00000454392 318 ntBASIC16.69■□□□□ 0.26
HMGA2P52926 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.69■□□□□ 0.26
HMGA2P52926 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.69■□□□□ 0.26
HMGA2P52926 AC092666.2-201ENST00000613287 246 ntBASIC16.69■□□□□ 0.26
HMGA2P52926 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGA2P52926 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGA2P52926 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA2P52926 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGA2P52926 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA2P52926 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA2P52926 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA2P52926 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGA2P52926 PCDHA12-202ENST00000613593 2588 ntBASIC16.69■□□□□ 0.26
HMGA2P52926 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGA2P52926 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA2P52926 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.68■□□□□ 0.26
HMGA2P52926 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA2P52926 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA2P52926 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA2P52926 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.68■□□□□ 0.26
HMGA2P52926 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HMGA2P52926 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA2P52926 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.68■□□□□ 0.26
HMGA2P52926 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HMGA2P52926 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA2P52926 AL023806.1-201ENST00000603994 1649 ntBASIC16.68■□□□□ 0.26
HMGA2P52926 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA2P52926 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA2P52926 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA2P52926 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA2P52926 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA2P52926 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA2P52926 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA2P52926 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
HMGA2P52926 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA2P52926 MIR4674-201ENST00000582457 87 ntBASIC16.68■□□□□ 0.26
HMGA2P52926 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.68■□□□□ 0.26
HMGA2P52926 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA2P52926 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA2P52926 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA2P52926 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA2P52926 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HMGA2P52926 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.68■□□□□ 0.26
HMGA2P52926 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA2P52926 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA2P52926 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGA2P52926 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGA2P52926 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HMGA2P52926 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGA2P52926 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGA2P52926 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGA2P52926 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGA2P52926 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.67■□□□□ 0.26
HMGA2P52926 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
HMGA2P52926 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.67■□□□□ 0.26
HMGA2P52926 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGA2P52926 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGA2P52926 ID1-201ENST00000376105 1233 ntBASIC16.67■□□□□ 0.26
HMGA2P52926 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGA2P52926 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGA2P52926 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HMGA2P52926 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.67■□□□□ 0.26
HMGA2P52926 SLC25A1P4-201ENST00000567977 778 ntBASIC16.67■□□□□ 0.26
HMGA2P52926 MIR3180-4-201ENST00000582223 153 ntBASIC16.67■□□□□ 0.26
HMGA2P52926 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.67■□□□□ 0.26
HMGA2P52926 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGA2P52926 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGA2P52926 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGA2P52926 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
HMGA2P52926 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGA2P52926 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms