Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.76■□□□□ 0.75
PDE6CP51160 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.76■□□□□ 0.75
PDE6CP51160 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PDE6CP51160 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.76■□□□□ 0.75
PDE6CP51160 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.76■□□□□ 0.75
PDE6CP51160 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.76■□□□□ 0.75
PDE6CP51160 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.76■□□□□ 0.75
PDE6CP51160 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.76■□□□□ 0.75
PDE6CP51160 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.76■□□□□ 0.75
PDE6CP51160 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PDE6CP51160 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.76■□□□□ 0.75
PDE6CP51160 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDE6CP51160 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.76■□□□□ 0.75
PDE6CP51160 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.76■□□□□ 0.75
PDE6CP51160 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6CP51160 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6CP51160 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6CP51160 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6CP51160 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
PDE6CP51160 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6CP51160 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6CP51160 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6CP51160 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PDE6CP51160 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.75■□□□□ 0.75
PDE6CP51160 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.75■□□□□ 0.75
PDE6CP51160 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6CP51160 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6CP51160 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.75■□□□□ 0.75
PDE6CP51160 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.75■□□□□ 0.75
PDE6CP51160 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.75■□□□□ 0.75
PDE6CP51160 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PDE6CP51160 AC091076.1-201ENST00000610741 619 ntBASIC19.75■□□□□ 0.75
PDE6CP51160 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6CP51160 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6CP51160 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.75■□□□□ 0.75
PDE6CP51160 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6CP51160 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6CP51160 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6CP51160 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6CP51160 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.75■□□□□ 0.75
PDE6CP51160 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6CP51160 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6CP51160 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6CP51160 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.75■□□□□ 0.75
PDE6CP51160 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
PDE6CP51160 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.74■□□□□ 0.75
PDE6CP51160 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6CP51160 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6CP51160 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6CP51160 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6CP51160 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.74■□□□□ 0.75
PDE6CP51160 KRT18P23-201ENST00000435622 1283 ntBASIC19.74■□□□□ 0.75
PDE6CP51160 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6CP51160 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.74■□□□□ 0.75
PDE6CP51160 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.74■□□□□ 0.75
PDE6CP51160 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.74■□□□□ 0.75
PDE6CP51160 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.74■□□□□ 0.75
PDE6CP51160 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
PDE6CP51160 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.74■□□□□ 0.75
PDE6CP51160 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.74■□□□□ 0.75
PDE6CP51160 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6CP51160 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6CP51160 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6CP51160 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
PDE6CP51160 HOXB1-202ENST00000577092 1414 ntBASIC19.74■□□□□ 0.75
PDE6CP51160 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6CP51160 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6CP51160 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6CP51160 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6CP51160 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.74■□□□□ 0.75
PDE6CP51160 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6CP51160 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6CP51160 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6CP51160 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PDE6CP51160 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6CP51160 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6CP51160 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6CP51160 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.73■□□□□ 0.75
PDE6CP51160 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms