Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SLC9A3P48764 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC9A3P48764 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC9A3P48764 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC9A3P48764 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC9A3P48764 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC9A3P48764 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC9A3P48764 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC9A3P48764 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SLC9A3P48764 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
SLC9A3P48764 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SLC9A3P48764 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 MIR564-202ENST00000385049 94 ntBASIC16.78■□□□□ 0.28
SLC9A3P48764 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 MCCD1P1-208ENST00000445732 328 ntBASIC16.78■□□□□ 0.28
SLC9A3P48764 TSPY20P-201ENST00000450910 630 ntBASIC16.78■□□□□ 0.28
SLC9A3P48764 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC9A3P48764 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC9A3P48764 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SLC9A3P48764 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC9A3P48764 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SLC9A3P48764 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SLC9A3P48764 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC9A3P48764 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC9A3P48764 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC9A3P48764 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
SLC9A3P48764 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
SLC9A3P48764 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC9A3P48764 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC9A3P48764 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC9A3P48764 AC135776.1-201ENST00000319817 2481 ntBASIC16.77■□□□□ 0.28
SLC9A3P48764 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
SLC9A3P48764 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC9A3P48764 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC9A3P48764 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SLC9A3P48764 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC9A3P48764 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC9A3P48764 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC9A3P48764 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC9A3P48764 AL023284.2-201ENST00000405850 579 ntBASIC16.77■□□□□ 0.28
SLC9A3P48764 MFAP1P1-201ENST00000442257 1255 ntBASIC16.77■□□□□ 0.28
SLC9A3P48764 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SLC9A3P48764 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC9A3P48764 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.77■□□□□ 0.28
SLC9A3P48764 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.77■□□□□ 0.28
SLC9A3P48764 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC9A3P48764 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC9A3P48764 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC9A3P48764 LINC00896-202ENST00000609602 2128 ntBASIC16.77■□□□□ 0.28
SLC9A3P48764 AC008622.2-201ENST00000617006 1229 ntBASIC16.77■□□□□ 0.28
SLC9A3P48764 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC9A3P48764 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC9A3P48764 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC9A3P48764 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC9A3P48764 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC9A3P48764 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC9A3P48764 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC9A3P48764 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
SLC9A3P48764 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC9A3P48764 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC9A3P48764 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.77■□□□□ 0.27
SLC9A3P48764 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC9A3P48764 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC9A3P48764 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC9A3P48764 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.77■□□□□ 0.27
SLC9A3P48764 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC9A3P48764 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC9A3P48764 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC9A3P48764 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC9A3P48764 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC9A3P48764 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC9A3P48764 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC9A3P48764 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC9A3P48764 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC9A3P48764 GNAS-203ENST00000306120 1878 ntBASIC16.76■□□□□ 0.27
SLC9A3P48764 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SLC9A3P48764 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC9A3P48764 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SLC9A3P48764 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC9A3P48764 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms