Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SOX2P48431 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SOX2P48431 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX2P48431 AP002982.1-201ENST00000492365 877 ntBASIC16.13■□□□□ 0.17
SOX2P48431 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SOX2P48431 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.13■□□□□ 0.17
SOX2P48431 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.13■□□□□ 0.17
SOX2P48431 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX2P48431 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX2P48431 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX2P48431 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SOX2P48431 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SOX2P48431 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SOX2P48431 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX2P48431 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SOX2P48431 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX2P48431 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.12■□□□□ 0.17
SOX2P48431 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.12■□□□□ 0.17
SOX2P48431 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.12■□□□□ 0.17
SOX2P48431 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX2P48431 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX2P48431 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX2P48431 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX2P48431 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SOX2P48431 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX2P48431 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX2P48431 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX2P48431 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX2P48431 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.12■□□□□ 0.17
SOX2P48431 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.12■□□□□ 0.17
SOX2P48431 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SOX2P48431 SLC25A6P5-201ENST00000435663 894 ntBASIC16.12■□□□□ 0.17
SOX2P48431 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.12■□□□□ 0.17
SOX2P48431 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.12■□□□□ 0.17
SOX2P48431 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.12■□□□□ 0.17
SOX2P48431 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX2P48431 AC124016.1-201ENST00000609552 612 ntBASIC16.12■□□□□ 0.17
SOX2P48431 AC011298.2-201ENST00000617989 482 ntBASIC16.12■□□□□ 0.17
SOX2P48431 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.12■□□□□ 0.17
SOX2P48431 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX2P48431 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.12■□□□□ 0.17
SOX2P48431 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX2P48431 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX2P48431 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.12■□□□□ 0.17
SOX2P48431 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SOX2P48431 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SOX2P48431 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.11■□□□□ 0.17
SOX2P48431 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SOX2P48431 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SOX2P48431 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SOX2P48431 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.11■□□□□ 0.17
SOX2P48431 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SOX2P48431 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
SOX2P48431 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SOX2P48431 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SOX2P48431 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SOX2P48431 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SOX2P48431 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.11■□□□□ 0.17
SOX2P48431 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.11■□□□□ 0.17
SOX2P48431 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.11■□□□□ 0.17
SOX2P48431 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
SOX2P48431 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SOX2P48431 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.11■□□□□ 0.17
SOX2P48431 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
SOX2P48431 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.11■□□□□ 0.17
SOX2P48431 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.11■□□□□ 0.17
SOX2P48431 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.11■□□□□ 0.17
SOX2P48431 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.11■□□□□ 0.17
SOX2P48431 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SOX2P48431 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SOX2P48431 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SOX2P48431 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SOX2P48431 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.11■□□□□ 0.17
SOX2P48431 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.11■□□□□ 0.17
SOX2P48431 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SOX2P48431 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.11■□□□□ 0.17
SOX2P48431 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SOX2P48431 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.1■□□□□ 0.17
SOX2P48431 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SOX2P48431 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SOX2P48431 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.1■□□□□ 0.17
SOX2P48431 FLJ13224-201ENST00000313737 1514 ntBASIC16.1■□□□□ 0.17
SOX2P48431 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SOX2P48431 AL096828.2-201ENST00000567259 1965 ntBASIC16.1■□□□□ 0.17
SOX2P48431 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SOX2P48431 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SOX2P48431 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SOX2P48431 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SOX2P48431 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.1■□□□□ 0.17
SOX2P48431 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.1■□□□□ 0.17
SOX2P48431 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.1■□□□□ 0.17
SOX2P48431 CKBP1-201ENST00000565489 1086 ntBASIC16.1■□□□□ 0.17
SOX2P48431 AC110285.5-201ENST00000611501 352 ntBASIC16.1■□□□□ 0.17
SOX2P48431 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SOX2P48431 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SOX2P48431 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SOX2P48431 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SOX2P48431 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.1■□□□□ 0.17
SOX2P48431 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SOX2P48431 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms