Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.29■□□□□ 0.36
GABRA4P48169 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.29■□□□□ 0.36
GABRA4P48169 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.29■□□□□ 0.36
GABRA4P48169 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.29■□□□□ 0.36
GABRA4P48169 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.29■□□□□ 0.36
GABRA4P48169 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.29■□□□□ 0.36
GABRA4P48169 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.29■□□□□ 0.36
GABRA4P48169 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GABRA4P48169 AL138781.2-201ENST00000617896 1843 ntBASIC17.28■□□□□ 0.36
GABRA4P48169 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GABRA4P48169 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.28■□□□□ 0.36
GABRA4P48169 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.28■□□□□ 0.36
GABRA4P48169 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
GABRA4P48169 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GABRA4P48169 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GABRA4P48169 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GABRA4P48169 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
GABRA4P48169 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GABRA4P48169 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.28■□□□□ 0.36
GABRA4P48169 AL450487.1-201ENST00000426799 995 ntBASIC17.28■□□□□ 0.36
GABRA4P48169 AC246785.2-201ENST00000432512 513 ntBASIC17.28■□□□□ 0.36
GABRA4P48169 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GABRA4P48169 AC068472.1-201ENST00000474589 881 ntBASIC17.28■□□□□ 0.36
GABRA4P48169 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GABRA4P48169 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.28■□□□□ 0.36
GABRA4P48169 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.28■□□□□ 0.36
GABRA4P48169 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.28■□□□□ 0.36
GABRA4P48169 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.28■□□□□ 0.36
GABRA4P48169 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GABRA4P48169 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GABRA4P48169 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.28■□□□□ 0.36
GABRA4P48169 LINC00602-201ENST00000629776 2065 ntBASIC17.28■□□□□ 0.36
GABRA4P48169 WIZP1-201ENST00000531444 2299 ntBASIC17.28■□□□□ 0.36
GABRA4P48169 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GABRA4P48169 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.28■□□□□ 0.36
GABRA4P48169 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GABRA4P48169 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GABRA4P48169 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GABRA4P48169 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GABRA4P48169 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GABRA4P48169 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
GABRA4P48169 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
GABRA4P48169 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GABRA4P48169 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.28■□□□□ 0.36
GABRA4P48169 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GABRA4P48169 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GABRA4P48169 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.27■□□□□ 0.36
GABRA4P48169 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GABRA4P48169 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GABRA4P48169 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
GABRA4P48169 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GABRA4P48169 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GABRA4P48169 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GABRA4P48169 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GABRA4P48169 TSPY12P-201ENST00000421279 868 ntBASIC17.27■□□□□ 0.36
GABRA4P48169 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.27■□□□□ 0.36
GABRA4P48169 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.27■□□□□ 0.36
GABRA4P48169 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.27■□□□□ 0.36
GABRA4P48169 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GABRA4P48169 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GABRA4P48169 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GABRA4P48169 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GABRA4P48169 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GABRA4P48169 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.27■□□□□ 0.36
GABRA4P48169 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.27■□□□□ 0.36
GABRA4P48169 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GABRA4P48169 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GABRA4P48169 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
GABRA4P48169 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
GABRA4P48169 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GABRA4P48169 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.27■□□□□ 0.35
GABRA4P48169 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
GABRA4P48169 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GABRA4P48169 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GABRA4P48169 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GABRA4P48169 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GABRA4P48169 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GABRA4P48169 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GABRA4P48169 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.26■□□□□ 0.35
GABRA4P48169 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.26■□□□□ 0.35
GABRA4P48169 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GABRA4P48169 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GABRA4P48169 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GABRA4P48169 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GABRA4P48169 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.26■□□□□ 0.35
GABRA4P48169 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
GABRA4P48169 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.26■□□□□ 0.35
GABRA4P48169 KRT17P6-201ENST00000453795 1220 ntBASIC17.26■□□□□ 0.35
GABRA4P48169 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.26■□□□□ 0.35
GABRA4P48169 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms