Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.98□□□□□ -0.01
NKX2-1P43699 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.98□□□□□ -0.01
NKX2-1P43699 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
NKX2-1P43699 POU5F1P3-201ENST00000428824 1078 ntBASIC14.98□□□□□ -0.01
NKX2-1P43699 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.98□□□□□ -0.01
NKX2-1P43699 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.98□□□□□ -0.01
NKX2-1P43699 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.98□□□□□ -0.01
NKX2-1P43699 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.98□□□□□ -0.01
NKX2-1P43699 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.98□□□□□ -0.01
NKX2-1P43699 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.98□□□□□ -0.01
NKX2-1P43699 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.98□□□□□ -0.01
NKX2-1P43699 AC092666.2-201ENST00000613287 246 ntBASIC14.98□□□□□ -0.01
NKX2-1P43699 AC092118.2-201ENST00000613495 667 ntBASIC14.98□□□□□ -0.01
NKX2-1P43699 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.98□□□□□ -0.01
NKX2-1P43699 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.98□□□□□ -0.01
NKX2-1P43699 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-1P43699 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-1P43699 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.98□□□□□ -0.01
NKX2-1P43699 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-1P43699 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-1P43699 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.98□□□□□ -0.01
NKX2-1P43699 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-1P43699 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-1P43699 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NKX2-1P43699 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-1P43699 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-1P43699 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-1P43699 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-1P43699 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NKX2-1P43699 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 AC141586.5-201ENST00000624546 2050 ntBASIC14.97□□□□□ -0.01
NKX2-1P43699 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX2-1P43699 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX2-1P43699 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX2-1P43699 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX2-1P43699 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
NKX2-1P43699 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX2-1P43699 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
NKX2-1P43699 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX2-1P43699 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX2-1P43699 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX2-1P43699 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX2-1P43699 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.97□□□□□ -0.01
NKX2-1P43699 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX2-1P43699 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.97□□□□□ -0.01
NKX2-1P43699 PRKY-204ENST00000533551 1019 ntBASIC14.97□□□□□ -0.01
NKX2-1P43699 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC14.97□□□□□ -0.01
NKX2-1P43699 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NKX2-1P43699 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX2-1P43699 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX2-1P43699 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.97□□□□□ -0.01
NKX2-1P43699 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
NKX2-1P43699 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX2-1P43699 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX2-1P43699 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 GMCL1P1-201ENST00000463439 1581 ntBASIC14.97□□□□□ -0.01
NKX2-1P43699 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX2-1P43699 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX2-1P43699 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.97□□□□□ -0.01
NKX2-1P43699 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
NKX2-1P43699 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX2-1P43699 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-1P43699 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.96□□□□□ -0.01
NKX2-1P43699 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-1P43699 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NKX2-1P43699 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-1P43699 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-1P43699 HTR7P1-201ENST00000538670 1336 ntBASIC14.96□□□□□ -0.01
NKX2-1P43699 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-1P43699 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-1P43699 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.96□□□□□ -0.01
NKX2-1P43699 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-1P43699 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-1P43699 SLC29A4P1-201ENST00000398760 971 ntBASIC14.96□□□□□ -0.01
NKX2-1P43699 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.96□□□□□ -0.01
NKX2-1P43699 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
NKX2-1P43699 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-1P43699 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.96□□□□□ -0.01
NKX2-1P43699 AC083906.2-201ENST00000511578 360 ntBASIC14.96□□□□□ -0.01
NKX2-1P43699 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms