Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.19■□□□□ 0.5
HMGCLP35914 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLP35914 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGCLP35914 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLP35914 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLP35914 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLP35914 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGCLP35914 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLP35914 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.18■□□□□ 0.5
HMGCLP35914 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLP35914 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGCLP35914 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLP35914 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLP35914 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLP35914 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLP35914 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLP35914 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGCLP35914 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLP35914 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.18■□□□□ 0.5
HMGCLP35914 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGCLP35914 VENTXP5-201ENST00000523979 775 ntBASIC18.18■□□□□ 0.5
HMGCLP35914 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.18■□□□□ 0.5
HMGCLP35914 AL136038.3-201ENST00000561909 1096 ntBASIC18.18■□□□□ 0.5
HMGCLP35914 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLP35914 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLP35914 AC093010.1-201ENST00000473625 1624 ntBASIC18.18■□□□□ 0.5
HMGCLP35914 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLP35914 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGCLP35914 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.18■□□□□ 0.5
HMGCLP35914 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGCLP35914 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLP35914 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HMGCLP35914 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.18■□□□□ 0.5
HMGCLP35914 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
HMGCLP35914 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLP35914 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLP35914 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLP35914 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLP35914 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLP35914 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HMGCLP35914 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLP35914 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLP35914 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HMGCLP35914 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HMGCLP35914 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HMGCLP35914 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLP35914 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.17■□□□□ 0.5
HMGCLP35914 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.17■□□□□ 0.5
HMGCLP35914 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.17■□□□□ 0.5
HMGCLP35914 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.17■□□□□ 0.5
HMGCLP35914 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.17■□□□□ 0.5
HMGCLP35914 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGCLP35914 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.17■□□□□ 0.5
HMGCLP35914 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.17■□□□□ 0.5
HMGCLP35914 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HMGCLP35914 AL121956.5-201ENST00000625261 221 ntBASIC18.17■□□□□ 0.5
HMGCLP35914 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.17■□□□□ 0.5
HMGCLP35914 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLP35914 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLP35914 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLP35914 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLP35914 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGCLP35914 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGCLP35914 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGCLP35914 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.17■□□□□ 0.5
HMGCLP35914 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLP35914 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLP35914 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGCLP35914 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLP35914 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.17■□□□□ 0.5
HMGCLP35914 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLP35914 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLP35914 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLP35914 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HMGCLP35914 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLP35914 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.16■□□□□ 0.5
HMGCLP35914 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLP35914 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.16■□□□□ 0.5
HMGCLP35914 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLP35914 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.16■□□□□ 0.5
HMGCLP35914 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLP35914 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLP35914 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.16■□□□□ 0.5
HMGCLP35914 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.16■□□□□ 0.5
HMGCLP35914 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.16■□□□□ 0.5
HMGCLP35914 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.16■□□□□ 0.5
HMGCLP35914 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.16■□□□□ 0.5
HMGCLP35914 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
HMGCLP35914 AC010331.1-201ENST00000611423 582 ntBASIC18.16■□□□□ 0.5
HMGCLP35914 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HMGCLP35914 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.16■□□□□ 0.5
HMGCLP35914 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLP35914 AL390961.4-201ENST00000623958 2535 ntBASIC18.16■□□□□ 0.5
HMGCLP35914 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLP35914 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLP35914 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLP35914 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMGCLP35914 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HMGCLP35914 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.16■□□□□ 0.5
HMGCLP35914 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms