Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HTR1EP28566 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.53■□□□□ 0.4
HTR1EP28566 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.53■□□□□ 0.4
HTR1EP28566 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HTR1EP28566 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
HTR1EP28566 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTR1EP28566 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTR1EP28566 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.53■□□□□ 0.4
HTR1EP28566 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.53■□□□□ 0.4
HTR1EP28566 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTR1EP28566 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HTR1EP28566 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HTR1EP28566 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTR1EP28566 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTR1EP28566 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTR1EP28566 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HTR1EP28566 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTR1EP28566 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HTR1EP28566 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTR1EP28566 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.52■□□□□ 0.4
HTR1EP28566 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.52■□□□□ 0.4
HTR1EP28566 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.52■□□□□ 0.4
HTR1EP28566 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTR1EP28566 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HTR1EP28566 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HTR1EP28566 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.52■□□□□ 0.4
HTR1EP28566 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.52■□□□□ 0.4
HTR1EP28566 NIFKP9-201ENST00000419265 221 ntBASIC17.52■□□□□ 0.4
HTR1EP28566 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.52■□□□□ 0.4
HTR1EP28566 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.52■□□□□ 0.4
HTR1EP28566 Z85996.1-201ENST00000494644 937 ntBASIC17.52■□□□□ 0.4
HTR1EP28566 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.52■□□□□ 0.4
HTR1EP28566 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
HTR1EP28566 WWOX-216ENST00000569818 525 ntBASIC17.52■□□□□ 0.4
HTR1EP28566 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.52■□□□□ 0.4
HTR1EP28566 KRT8P11-201ENST00000409686 1436 ntBASIC17.52■□□□□ 0.4
HTR1EP28566 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HTR1EP28566 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.52■□□□□ 0.39
HTR1EP28566 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HTR1EP28566 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HTR1EP28566 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HTR1EP28566 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
HTR1EP28566 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HTR1EP28566 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HTR1EP28566 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HTR1EP28566 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HTR1EP28566 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
HTR1EP28566 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
HTR1EP28566 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1EP28566 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HTR1EP28566 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1EP28566 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.51■□□□□ 0.39
HTR1EP28566 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1EP28566 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.51■□□□□ 0.39
HTR1EP28566 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1EP28566 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.51■□□□□ 0.39
HTR1EP28566 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.51■□□□□ 0.39
HTR1EP28566 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1EP28566 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.51■□□□□ 0.39
HTR1EP28566 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1EP28566 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.51■□□□□ 0.39
HTR1EP28566 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.51■□□□□ 0.39
HTR1EP28566 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1EP28566 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.51■□□□□ 0.39
HTR1EP28566 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.51■□□□□ 0.39
HTR1EP28566 MYLKP1-201ENST00000509077 1580 ntBASIC17.51■□□□□ 0.39
HTR1EP28566 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.51■□□□□ 0.39
HTR1EP28566 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.51■□□□□ 0.39
HTR1EP28566 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.51■□□□□ 0.39
HTR1EP28566 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1EP28566 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.51■□□□□ 0.39
HTR1EP28566 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
HTR1EP28566 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1EP28566 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HTR1EP28566 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1EP28566 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1EP28566 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1EP28566 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1EP28566 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HTR1EP28566 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.51■□□□□ 0.39
HTR1EP28566 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.5■□□□□ 0.39
HTR1EP28566 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HTR1EP28566 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.5■□□□□ 0.39
HTR1EP28566 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HTR1EP28566 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HTR1EP28566 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HTR1EP28566 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HTR1EP28566 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.5■□□□□ 0.39
HTR1EP28566 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.5■□□□□ 0.39
HTR1EP28566 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HTR1EP28566 PRSS44-201ENST00000515154 1146 ntBASIC17.5■□□□□ 0.39
HTR1EP28566 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.5■□□□□ 0.39
HTR1EP28566 AC010203.1-204ENST00000548782 407 ntBASIC17.5■□□□□ 0.39
HTR1EP28566 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.5■□□□□ 0.39
HTR1EP28566 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HTR1EP28566 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.5■□□□□ 0.39
HTR1EP28566 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HTR1EP28566 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HTR1EP28566 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HTR1EP28566 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms