Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LAMA1P25391 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.83■□□□□ 0.44
LAMA1P25391 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
LAMA1P25391 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.83■□□□□ 0.44
LAMA1P25391 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LAMA1P25391 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LAMA1P25391 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LAMA1P25391 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LAMA1P25391 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LAMA1P25391 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
LAMA1P25391 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
LAMA1P25391 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.83■□□□□ 0.44
LAMA1P25391 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.83■□□□□ 0.44
LAMA1P25391 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LAMA1P25391 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LAMA1P25391 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LAMA1P25391 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.83■□□□□ 0.44
LAMA1P25391 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LAMA1P25391 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LAMA1P25391 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
LAMA1P25391 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.82■□□□□ 0.44
LAMA1P25391 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.82■□□□□ 0.44
LAMA1P25391 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.82■□□□□ 0.44
LAMA1P25391 DNAJB3-201ENST00000446806 729 ntBASIC17.82■□□□□ 0.44
LAMA1P25391 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.82■□□□□ 0.44
LAMA1P25391 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LAMA1P25391 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LAMA1P25391 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LAMA1P25391 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LAMA1P25391 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LAMA1P25391 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.82■□□□□ 0.44
LAMA1P25391 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LAMA1P25391 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LAMA1P25391 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LAMA1P25391 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.82■□□□□ 0.44
LAMA1P25391 MIR3197-201ENST00000582241 73 ntBASIC17.82■□□□□ 0.44
LAMA1P25391 AL596442.2-201ENST00000610240 980 ntBASIC17.82■□□□□ 0.44
LAMA1P25391 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LAMA1P25391 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LAMA1P25391 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.81■□□□□ 0.44
LAMA1P25391 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.81■□□□□ 0.44
LAMA1P25391 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.81■□□□□ 0.44
LAMA1P25391 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.81■□□□□ 0.44
LAMA1P25391 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.81■□□□□ 0.44
LAMA1P25391 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LAMA1P25391 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMA1P25391 AL024508.2-201ENST00000607749 1894 ntBASIC17.81■□□□□ 0.44
LAMA1P25391 SDHAP2-201ENST00000455183 2001 ntBASIC17.81■□□□□ 0.44
LAMA1P25391 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LAMA1P25391 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LAMA1P25391 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LAMA1P25391 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMA1P25391 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMA1P25391 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
LAMA1P25391 KRT18P27-201ENST00000427733 1299 ntBASIC17.81■□□□□ 0.44
LAMA1P25391 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.81■□□□□ 0.44
LAMA1P25391 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.81■□□□□ 0.44
LAMA1P25391 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.81■□□□□ 0.44
LAMA1P25391 AC040169.1-201ENST00000565382 521 ntBASIC17.81■□□□□ 0.44
LAMA1P25391 AC002347.1-201ENST00000569543 541 ntBASIC17.81■□□□□ 0.44
LAMA1P25391 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LAMA1P25391 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMA1P25391 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMA1P25391 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMA1P25391 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMA1P25391 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
LAMA1P25391 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMA1P25391 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
LAMA1P25391 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.8■□□□□ 0.44
LAMA1P25391 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LAMA1P25391 CYMP-203ENST00000474680 1263 ntBASIC17.8■□□□□ 0.44
LAMA1P25391 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.8■□□□□ 0.44
LAMA1P25391 UNC93B6-202ENST00000528242 690 ntBASIC17.8■□□□□ 0.44
LAMA1P25391 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LAMA1P25391 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LAMA1P25391 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.8■□□□□ 0.44
LAMA1P25391 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.8■□□□□ 0.44
LAMA1P25391 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.8■□□□□ 0.44
LAMA1P25391 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.8■□□□□ 0.44
LAMA1P25391 CNN2P11-201ENST00000429351 262 ntBASIC17.8■□□□□ 0.44
LAMA1P25391 YBX1P5-201ENST00000509441 847 ntBASIC17.8■□□□□ 0.44
LAMA1P25391 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.8■□□□□ 0.44
LAMA1P25391 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
LAMA1P25391 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LAMA1P25391 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.8■□□□□ 0.44
LAMA1P25391 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LAMA1P25391 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LAMA1P25391 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.8■□□□□ 0.44
LAMA1P25391 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
LAMA1P25391 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.8■□□□□ 0.44
LAMA1P25391 Z83851.2-201ENST00000609564 659 ntBASIC17.8■□□□□ 0.44
LAMA1P25391 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.8■□□□□ 0.44
LAMA1P25391 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LAMA1P25391 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LAMA1P25391 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LAMA1P25391 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.79■□□□□ 0.44
LAMA1P25391 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LAMA1P25391 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LAMA1P25391 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LAMA1P25391 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms