Protein–RNA interactions for Protein: P18428

LBP, Lipopolysaccharide-binding protein, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBPP18428 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
LBPP18428 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.68■□□□□ 0.42
LBPP18428 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.68■□□□□ 0.42
LBPP18428 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LBPP18428 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LBPP18428 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LBPP18428 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.68■□□□□ 0.42
LBPP18428 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.68■□□□□ 0.42
LBPP18428 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LBPP18428 PKD1P1-201ENST00000458669 6805 ntBASIC17.68■□□□□ 0.42
LBPP18428 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LBPP18428 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LBPP18428 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.67■□□□□ 0.42
LBPP18428 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.67■□□□□ 0.42
LBPP18428 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LBPP18428 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LBPP18428 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LBPP18428 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.67■□□□□ 0.42
LBPP18428 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LBPP18428 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.67■□□□□ 0.42
LBPP18428 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.67■□□□□ 0.42
LBPP18428 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.67■□□□□ 0.42
LBPP18428 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.67■□□□□ 0.42
LBPP18428 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LBPP18428 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LBPP18428 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
LBPP18428 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.67■□□□□ 0.42
LBPP18428 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBPP18428 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LBPP18428 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LBPP18428 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LBPP18428 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LBPP18428 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.66■□□□□ 0.42
LBPP18428 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LBPP18428 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LBPP18428 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LBPP18428 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.66■□□□□ 0.42
LBPP18428 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LBPP18428 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.66■□□□□ 0.42
LBPP18428 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.66■□□□□ 0.42
LBPP18428 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LBPP18428 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
LBPP18428 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.66■□□□□ 0.42
LBPP18428 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LBPP18428 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LBPP18428 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LBPP18428 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
LBPP18428 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
LBPP18428 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.65■□□□□ 0.42
LBPP18428 SDHAP2-201ENST00000455183 2001 ntBASIC17.65■□□□□ 0.42
LBPP18428 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.65■□□□□ 0.42
LBPP18428 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LBPP18428 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.65■□□□□ 0.42
LBPP18428 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
LBPP18428 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LBPP18428 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.65■□□□□ 0.42
LBPP18428 AC009102.3-201ENST00000623118 1491 ntBASIC17.65■□□□□ 0.42
LBPP18428 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LBPP18428 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LBPP18428 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LBPP18428 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LBPP18428 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.65■□□□□ 0.42
LBPP18428 FAM197Y1-201ENST00000421178 764 ntBASIC17.65■□□□□ 0.42
LBPP18428 MFAP1P1-201ENST00000442257 1255 ntBASIC17.65■□□□□ 0.42
LBPP18428 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
LBPP18428 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.65■□□□□ 0.42
LBPP18428 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.65■□□□□ 0.42
LBPP18428 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.65■□□□□ 0.42
LBPP18428 SLC25A1P4-201ENST00000567977 778 ntBASIC17.65■□□□□ 0.42
LBPP18428 MIR3180-5-201ENST00000583743 153 ntBASIC17.65■□□□□ 0.42
LBPP18428 DGCR10-201ENST00000609839 495 ntBASIC17.65■□□□□ 0.42
LBPP18428 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.65■□□□□ 0.42
LBPP18428 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LBPP18428 AL163051.1-201ENST00000569214 1512 ntBASIC17.65■□□□□ 0.42
LBPP18428 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LBPP18428 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LBPP18428 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
LBPP18428 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.65■□□□□ 0.42
LBPP18428 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms