Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ERCC2P18074 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.82■□□□□ 0.6
ERCC2P18074 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC2P18074 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC2P18074 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.82■□□□□ 0.6
ERCC2P18074 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.82■□□□□ 0.6
ERCC2P18074 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ERCC2P18074 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.82■□□□□ 0.6
ERCC2P18074 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC2P18074 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.81■□□□□ 0.6
ERCC2P18074 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC2P18074 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC2P18074 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC2P18074 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ERCC2P18074 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.81■□□□□ 0.6
ERCC2P18074 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ERCC2P18074 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ERCC2P18074 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC2P18074 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC2P18074 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC2P18074 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC2P18074 AL359075.1-203ENST00000462729 1002 ntBASIC18.81■□□□□ 0.6
ERCC2P18074 DUX4L26-201ENST00000489078 1255 ntBASIC18.81■□□□□ 0.6
ERCC2P18074 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ERCC2P18074 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
ERCC2P18074 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.81■□□□□ 0.6
ERCC2P18074 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC2P18074 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC2P18074 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ERCC2P18074 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ERCC2P18074 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.81■□□□□ 0.6
ERCC2P18074 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.81■□□□□ 0.6
ERCC2P18074 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC2P18074 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.81■□□□□ 0.6
ERCC2P18074 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC2P18074 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC2P18074 AL391807.1-203ENST00000604392 2365 ntBASIC18.81■□□□□ 0.6
ERCC2P18074 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC2P18074 AL096828.2-201ENST00000567259 1965 ntBASIC18.81■□□□□ 0.6
ERCC2P18074 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC2P18074 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ERCC2P18074 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC2P18074 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC2P18074 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC2P18074 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ERCC2P18074 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC2P18074 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC2P18074 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC2P18074 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC2P18074 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
ERCC2P18074 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC2P18074 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC2P18074 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC2P18074 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ERCC2P18074 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.8■□□□□ 0.6
ERCC2P18074 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ERCC2P18074 AC092597.1-201ENST00000487352 616 ntBASIC18.8■□□□□ 0.6
ERCC2P18074 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC2P18074 AC063952.2-201ENST00000498792 1227 ntBASIC18.8■□□□□ 0.6
ERCC2P18074 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.8■□□□□ 0.6
ERCC2P18074 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.8■□□□□ 0.6
ERCC2P18074 AL136038.4-201ENST00000603606 1261 ntBASIC18.8■□□□□ 0.6
ERCC2P18074 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC2P18074 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC2P18074 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ERCC2P18074 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC2P18074 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.8■□□□□ 0.6
ERCC2P18074 REXO1L9P-201ENST00000604264 2108 ntBASIC18.8■□□□□ 0.6
ERCC2P18074 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.8■□□□□ 0.6
ERCC2P18074 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC2P18074 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC2P18074 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ERCC2P18074 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC2P18074 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
ERCC2P18074 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC2P18074 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.79■□□□□ 0.6
ERCC2P18074 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC2P18074 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC2P18074 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC2P18074 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC2P18074 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC2P18074 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC2P18074 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC2P18074 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.79■□□□□ 0.6
ERCC2P18074 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.79■□□□□ 0.6
ERCC2P18074 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.79■□□□□ 0.6
ERCC2P18074 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC2P18074 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.79■□□□□ 0.6
ERCC2P18074 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC2P18074 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
ERCC2P18074 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ERCC2P18074 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ERCC2P18074 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.79■□□□□ 0.6
ERCC2P18074 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC2P18074 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC2P18074 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.79■□□□□ 0.6
ERCC2P18074 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC2P18074 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ERCC2P18074 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ERCC2P18074 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms