Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBL4AP11441 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
UBL4AP11441 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
UBL4AP11441 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBL4AP11441 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.92■□□□□ 0.3
UBL4AP11441 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBL4AP11441 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBL4AP11441 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBL4AP11441 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBL4AP11441 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBL4AP11441 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.92■□□□□ 0.3
UBL4AP11441 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBL4AP11441 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.92■□□□□ 0.3
UBL4AP11441 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBL4AP11441 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.92■□□□□ 0.3
UBL4AP11441 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
UBL4AP11441 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.92■□□□□ 0.3
UBL4AP11441 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBL4AP11441 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
UBL4AP11441 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
UBL4AP11441 AC133561.5-201ENST00000635547 218 ntBASIC16.92■□□□□ 0.3
UBL4AP11441 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBL4AP11441 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBL4AP11441 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBL4AP11441 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
UBL4AP11441 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBL4AP11441 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBL4AP11441 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBL4AP11441 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBL4AP11441 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.91■□□□□ 0.3
UBL4AP11441 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBL4AP11441 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
UBL4AP11441 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
UBL4AP11441 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBL4AP11441 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.91■□□□□ 0.3
UBL4AP11441 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.91■□□□□ 0.3
UBL4AP11441 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
UBL4AP11441 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.91■□□□□ 0.3
UBL4AP11441 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBL4AP11441 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.91■□□□□ 0.3
UBL4AP11441 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBL4AP11441 SLC25A3P1-201ENST00000443844 931 ntBASIC16.91■□□□□ 0.3
UBL4AP11441 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.91■□□□□ 0.3
UBL4AP11441 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.91■□□□□ 0.3
UBL4AP11441 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.91■□□□□ 0.3
UBL4AP11441 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.91■□□□□ 0.3
UBL4AP11441 AC009065.1-201ENST00000564055 1225 ntBASIC16.91■□□□□ 0.3
UBL4AP11441 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
UBL4AP11441 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.91■□□□□ 0.3
UBL4AP11441 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
UBL4AP11441 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
UBL4AP11441 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBL4AP11441 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
UBL4AP11441 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBL4AP11441 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBL4AP11441 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBL4AP11441 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBL4AP11441 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
UBL4AP11441 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBL4AP11441 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBL4AP11441 AL163051.1-201ENST00000569214 1512 ntBASIC16.91■□□□□ 0.3
UBL4AP11441 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
UBL4AP11441 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
UBL4AP11441 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
UBL4AP11441 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
UBL4AP11441 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 AP000523.1-201ENST00000398242 1049 ntBASIC16.9■□□□□ 0.3
UBL4AP11441 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
UBL4AP11441 ECEL1P3-201ENST00000427961 737 ntBASIC16.9■□□□□ 0.3
UBL4AP11441 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
UBL4AP11441 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.9■□□□□ 0.3
UBL4AP11441 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.9■□□□□ 0.3
UBL4AP11441 NEK4P2-201ENST00000580004 1012 ntBASIC16.9■□□□□ 0.3
UBL4AP11441 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.9■□□□□ 0.3
UBL4AP11441 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.9■□□□□ 0.3
UBL4AP11441 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.9■□□□□ 0.3
UBL4AP11441 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
UBL4AP11441 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
UBL4AP11441 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
UBL4AP11441 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms