Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 AC124864.1-201ENST00000623408 392 ntBASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 KRT18P31-201ENST00000506277 1292 ntBASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 FOSL1P1-201ENST00000511041 816 ntBASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 AC074051.2-201ENST00000565115 352 ntBASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40ALP0C0E4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 AC246785.2-201ENST00000432512 513 ntBASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 AL732292.2-201ENST00000609649 430 ntBASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 AL138781.2-201ENST00000617896 1843 ntBASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40ALP0C0E4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RAB40ALP0C0E4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RAB40ALP0C0E4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms