Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TPM2P07951 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.83■□□□□ 0.92
TPM2P07951 ANO7L1-203ENST00000602586 1720 ntBASIC20.83■□□□□ 0.92
TPM2P07951 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
TPM2P07951 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.83■□□□□ 0.92
TPM2P07951 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TPM2P07951 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
TPM2P07951 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TPM2P07951 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TPM2P07951 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
TPM2P07951 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.83■□□□□ 0.92
TPM2P07951 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TPM2P07951 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM2P07951 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.82■□□□□ 0.92
TPM2P07951 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.82■□□□□ 0.92
TPM2P07951 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.82■□□□□ 0.92
TPM2P07951 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM2P07951 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TPM2P07951 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM2P07951 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.82■□□□□ 0.92
TPM2P07951 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TPM2P07951 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM2P07951 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TPM2P07951 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM2P07951 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TPM2P07951 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TPM2P07951 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM2P07951 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TPM2P07951 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.82■□□□□ 0.92
TPM2P07951 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.82■□□□□ 0.92
TPM2P07951 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.82■□□□□ 0.92
TPM2P07951 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM2P07951 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.82■□□□□ 0.92
TPM2P07951 HLA-A-209ENST00000638375 975 ntBASIC20.82■□□□□ 0.92
TPM2P07951 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.82■□□□□ 0.92
TPM2P07951 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.82■□□□□ 0.92
TPM2P07951 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM2P07951 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TPM2P07951 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM2P07951 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM2P07951 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM2P07951 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.82■□□□□ 0.92
TPM2P07951 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TPM2P07951 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.82■□□□□ 0.92
TPM2P07951 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TPM2P07951 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.81■□□□□ 0.92
TPM2P07951 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
TPM2P07951 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TPM2P07951 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM2P07951 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM2P07951 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TPM2P07951 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM2P07951 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM2P07951 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM2P07951 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM2P07951 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM2P07951 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TPM2P07951 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.81■□□□□ 0.92
TPM2P07951 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.81■□□□□ 0.92
TPM2P07951 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TPM2P07951 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TPM2P07951 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.81■□□□□ 0.92
TPM2P07951 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
TPM2P07951 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.81■□□□□ 0.92
TPM2P07951 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM2P07951 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM2P07951 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.81■□□□□ 0.92
TPM2P07951 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM2P07951 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM2P07951 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM2P07951 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
TPM2P07951 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM2P07951 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM2P07951 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TPM2P07951 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TPM2P07951 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TPM2P07951 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC20.81■□□□□ 0.92
TPM2P07951 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TPM2P07951 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.8■□□□□ 0.92
TPM2P07951 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.8■□□□□ 0.92
TPM2P07951 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TPM2P07951 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM2P07951 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM2P07951 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.8■□□□□ 0.92
TPM2P07951 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TPM2P07951 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM2P07951 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM2P07951 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM2P07951 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM2P07951 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM2P07951 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.8■□□□□ 0.92
TPM2P07951 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TPM2P07951 SLC25A6P5-201ENST00000435663 894 ntBASIC20.8■□□□□ 0.92
TPM2P07951 TSPY23P-201ENST00000440136 739 ntBASIC20.8■□□□□ 0.92
TPM2P07951 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.8■□□□□ 0.92
TPM2P07951 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.8■□□□□ 0.92
TPM2P07951 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM2P07951 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TPM2P07951 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.8■□□□□ 0.92
TPM2P07951 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms