Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL5A2P05997 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL5A2P05997 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL5A2P05997 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC23.97■■□□□ 1.43
COL5A2P05997 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL5A2P05997 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL5A2P05997 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
COL5A2P05997 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.97■■□□□ 1.43
COL5A2P05997 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL5A2P05997 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL5A2P05997 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC23.96■■□□□ 1.43
COL5A2P05997 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
COL5A2P05997 AL161938.1-201ENST00000569833 2180 ntBASIC23.96■■□□□ 1.43
COL5A2P05997 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL5A2P05997 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
COL5A2P05997 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC23.96■■□□□ 1.43
COL5A2P05997 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL5A2P05997 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC23.96■■□□□ 1.43
COL5A2P05997 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC23.96■■□□□ 1.43
COL5A2P05997 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
COL5A2P05997 AC108751.1-201ENST00000490852 363 ntBASIC23.96■■□□□ 1.43
COL5A2P05997 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL5A2P05997 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL5A2P05997 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC23.96■■□□□ 1.43
COL5A2P05997 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL5A2P05997 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC23.96■■□□□ 1.43
COL5A2P05997 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL5A2P05997 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL5A2P05997 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL5A2P05997 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL5A2P05997 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
COL5A2P05997 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC23.96■■□□□ 1.43
COL5A2P05997 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.96■■□□□ 1.43
COL5A2P05997 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC23.96■■□□□ 1.43
COL5A2P05997 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
COL5A2P05997 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL5A2P05997 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL5A2P05997 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL5A2P05997 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC23.95■■□□□ 1.42
COL5A2P05997 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC23.95■■□□□ 1.42
COL5A2P05997 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL5A2P05997 RFPL4AP1-201ENST00000530883 850 ntBASIC23.95■■□□□ 1.42
COL5A2P05997 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL5A2P05997 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL5A2P05997 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL5A2P05997 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL5A2P05997 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL5A2P05997 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL5A2P05997 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.95■■□□□ 1.42
COL5A2P05997 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.95■■□□□ 1.42
COL5A2P05997 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC23.94■■□□□ 1.42
COL5A2P05997 MCCD1P2-201ENST00000423228 335 ntBASIC23.94■■□□□ 1.42
COL5A2P05997 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC23.94■■□□□ 1.42
COL5A2P05997 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
COL5A2P05997 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
COL5A2P05997 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.94■■□□□ 1.42
COL5A2P05997 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
COL5A2P05997 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC23.94■■□□□ 1.42
COL5A2P05997 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
COL5A2P05997 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
COL5A2P05997 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC23.94■■□□□ 1.42
COL5A2P05997 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL5A2P05997 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC23.94■■□□□ 1.42
COL5A2P05997 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
COL5A2P05997 PMPCAP1-201ENST00000508114 1576 ntBASIC23.94■■□□□ 1.42
COL5A2P05997 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL5A2P05997 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL5A2P05997 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC23.94■■□□□ 1.42
COL5A2P05997 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC23.94■■□□□ 1.42
COL5A2P05997 AL049812.1-201ENST00000432563 2267 ntBASIC23.94■■□□□ 1.42
COL5A2P05997 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC23.94■■□□□ 1.42
COL5A2P05997 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL5A2P05997 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
COL5A2P05997 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC23.94■■□□□ 1.42
COL5A2P05997 CYMP-203ENST00000474680 1263 ntBASIC23.94■■□□□ 1.42
COL5A2P05997 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
COL5A2P05997 AL022326.1-202ENST00000641533 845 ntBASIC23.94■■□□□ 1.42
COL5A2P05997 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC23.93■■□□□ 1.42
COL5A2P05997 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC23.93■■□□□ 1.42
COL5A2P05997 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
COL5A2P05997 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
COL5A2P05997 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL5A2P05997 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
COL5A2P05997 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
COL5A2P05997 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC23.93■■□□□ 1.42
COL5A2P05997 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL5A2P05997 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL5A2P05997 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC23.93■■□□□ 1.42
COL5A2P05997 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC23.93■■□□□ 1.42
COL5A2P05997 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC23.93■■□□□ 1.42
COL5A2P05997 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
COL5A2P05997 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC23.93■■□□□ 1.42
COL5A2P05997 AC006557.2-201ENST00000592985 1240 ntBASIC23.93■■□□□ 1.42
COL5A2P05997 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC23.93■■□□□ 1.42
COL5A2P05997 MIR1199-201ENST00000621445 119 ntBASIC23.93■■□□□ 1.42
COL5A2P05997 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
COL5A2P05997 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
COL5A2P05997 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC23.93■■□□□ 1.42
COL5A2P05997 AL499627.1-201ENST00000569373 2188 ntBASIC23.92■■□□□ 1.42
COL5A2P05997 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms