Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 AC092647.4-201ENST00000457211 535 ntBASIC18.54■□□□□ 0.56
HLA-DQB2P05538 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 AC022616.7-201ENST00000525383 220 ntBASIC18.54■□□□□ 0.56
HLA-DQB2P05538 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DQB2P05538 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 AC112907.2-201ENST00000448639 330 ntBASIC18.53■□□□□ 0.56
HLA-DQB2P05538 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQB2P05538 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 AC093010.1-201ENST00000473625 1624 ntBASIC18.52■□□□□ 0.56
HLA-DQB2P05538 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 HLA-F-220ENST00000434407 884 ntBASIC18.52■□□□□ 0.56
HLA-DQB2P05538 FAM210CP-201ENST00000445714 574 ntBASIC18.52■□□□□ 0.56
HLA-DQB2P05538 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 HYMAI.1-201ENST00000620949 238 ntBASIC18.52■□□□□ 0.56
HLA-DQB2P05538 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.52■□□□□ 0.56
HLA-DQB2P05538 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DQB2P05538 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
HLA-DQB2P05538 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DQB2P05538 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DQB2P05538 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DQB2P05538 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DQB2P05538 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DQB2P05538 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.52■□□□□ 0.55
HLA-DQB2P05538 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.51■□□□□ 0.55
HLA-DQB2P05538 NOC2LP1-202ENST00000452600 2235 ntBASIC18.51■□□□□ 0.55
HLA-DQB2P05538 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms