Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DPB1P04440 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DPB1P04440 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 REXO1L9P-201ENST00000604264 2108 ntBASIC16.46■□□□□ 0.23
HLA-DPB1P04440 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 NIFKP9-201ENST00000419265 221 ntBASIC16.46■□□□□ 0.23
HLA-DPB1P04440 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 AL160286.2-201ENST00000567150 934 ntBASIC16.46■□□□□ 0.23
HLA-DPB1P04440 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DPB1P04440 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DPB1P04440 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DPB1P04440 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.22
HLA-DPB1P04440 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.46■□□□□ 0.22
HLA-DPB1P04440 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 KRT8P45-201ENST00000414328 1447 ntBASIC16.45■□□□□ 0.22
HLA-DPB1P04440 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 AL353807.1-201ENST00000427475 662 ntBASIC16.45■□□□□ 0.22
HLA-DPB1P04440 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 CR392000.1-201ENST00000624770 1228 ntBASIC16.45■□□□□ 0.22
HLA-DPB1P04440 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DPB1P04440 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPB1P04440 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPB1P04440 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPB1P04440 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPB1P04440 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPB1P04440 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DPB1P04440 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
HLA-DPB1P04440 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPB1P04440 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.44■□□□□ 0.22
HLA-DPB1P04440 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPB1P04440 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPB1P04440 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.44■□□□□ 0.22
HLA-DPB1P04440 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DPB1P04440 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DPB1P04440 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
HLA-DPB1P04440 AC099398.1-201ENST00000567919 2776 ntBASIC16.44■□□□□ 0.22
HLA-DPB1P04440 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPB1P04440 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HLA-DPB1P04440 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DPB1P04440 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HLA-DPB1P04440 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms