Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 KRT18P13-201ENST00000400056 1290 ntBASIC21.93■■□□□ 1.1
COL1A1P02452 POM121L3P-201ENST00000419331 1163 ntBASIC21.93■■□□□ 1.1
COL1A1P02452 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.93■■□□□ 1.1
COL1A1P02452 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC21.93■■□□□ 1.1
COL1A1P02452 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.93■■□□□ 1.1
COL1A1P02452 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL1A1P02452 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL1A1P02452 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL1A1P02452 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.93■■□□□ 1.1
COL1A1P02452 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL1A1P02452 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.93■■□□□ 1.1
COL1A1P02452 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL1A1P02452 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL1A1P02452 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL1A1P02452 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.92■■□□□ 1.1
COL1A1P02452 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL1A1P02452 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL1A1P02452 AP000974.1-201ENST00000623909 2387 ntBASIC21.92■■□□□ 1.1
COL1A1P02452 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL1A1P02452 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
COL1A1P02452 MIR574-201ENST00000385209 96 ntBASIC21.92■■□□□ 1.1
COL1A1P02452 MTCL1P1-201ENST00000446207 792 ntBASIC21.92■■□□□ 1.1
COL1A1P02452 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
COL1A1P02452 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.92■■□□□ 1.1
COL1A1P02452 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.92■■□□□ 1.1
COL1A1P02452 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.92■■□□□ 1.1
COL1A1P02452 AC139530.3-201ENST00000620344 690 ntBASIC21.92■■□□□ 1.1
COL1A1P02452 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL1A1P02452 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
COL1A1P02452 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL1A1P02452 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.92■■□□□ 1.1
COL1A1P02452 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL1A1P02452 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL1A1P02452 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL1A1P02452 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL1A1P02452 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL1A1P02452 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL1A1P02452 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL1A1P02452 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.92■■□□□ 1.1
COL1A1P02452 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL1A1P02452 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
COL1A1P02452 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
COL1A1P02452 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
COL1A1P02452 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
COL1A1P02452 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL1A1P02452 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.91■■□□□ 1.1
COL1A1P02452 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.91■■□□□ 1.1
COL1A1P02452 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.91■■□□□ 1.1
COL1A1P02452 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC21.91■■□□□ 1.1
COL1A1P02452 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL1A1P02452 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL1A1P02452 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.91■■□□□ 1.1
COL1A1P02452 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
COL1A1P02452 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL1A1P02452 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL1A1P02452 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
COL1A1P02452 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.91■■□□□ 1.1
COL1A1P02452 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL1A1P02452 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL1A1P02452 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.91■■□□□ 1.1
COL1A1P02452 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
COL1A1P02452 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL1A1P02452 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
COL1A1P02452 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.9■■□□□ 1.1
COL1A1P02452 KRT18P65-201ENST00000439811 1286 ntBASIC21.9■■□□□ 1.1
COL1A1P02452 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL1A1P02452 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.9■■□□□ 1.1
COL1A1P02452 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL1A1P02452 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL1A1P02452 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.9■■□□□ 1.1
COL1A1P02452 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL1A1P02452 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.9■■□□□ 1.1
COL1A1P02452 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL1A1P02452 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL1A1P02452 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.9■■□□□ 1.1
COL1A1P02452 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL1A1P02452 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.9■■□□□ 1.1
COL1A1P02452 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.9■■□□□ 1.1
COL1A1P02452 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.9■■□□□ 1.1
COL1A1P02452 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.9■■□□□ 1.1
COL1A1P02452 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL1A1P02452 SLC25A1P1-201ENST00000528351 927 ntBASIC21.9■■□□□ 1.1
COL1A1P02452 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.9■■□□□ 1.1
COL1A1P02452 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
COL1A1P02452 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
COL1A1P02452 AF228730.7-201ENST00000641842 219 ntBASIC21.9■■□□□ 1.1
COL1A1P02452 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL1A1P02452 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
COL1A1P02452 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL1A1P02452 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL1A1P02452 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL1A1P02452 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL1A1P02452 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
COL1A1P02452 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
COL1A1P02452 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
COL1A1P02452 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL1A1P02452 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
COL1A1P02452 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
COL1A1P02452 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL1A1P02452 AC018712.1-201ENST00000455767 687 ntBASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms