Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTAP01374 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.79□□□□□ -0.2
LTAP01374 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC13.79□□□□□ -0.2
LTAP01374 NKILA-202ENST00000614771 2598 ntBASIC13.79□□□□□ -0.2
LTAP01374 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LTAP01374 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTAP01374 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.79□□□□□ -0.2
LTAP01374 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTAP01374 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LTAP01374 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTAP01374 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTAP01374 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTAP01374 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LTAP01374 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTAP01374 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.79□□□□□ -0.2
LTAP01374 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
LTAP01374 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTAP01374 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTAP01374 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.79□□□□□ -0.2
LTAP01374 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTAP01374 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.78□□□□□ -0.2
LTAP01374 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTAP01374 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTAP01374 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTAP01374 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTAP01374 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LTAP01374 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LTAP01374 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTAP01374 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTAP01374 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LTAP01374 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTAP01374 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTAP01374 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTAP01374 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LTAP01374 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTAP01374 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
LTAP01374 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LTAP01374 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.78□□□□□ -0.2
LTAP01374 AL445675.2-201ENST00000620291 557 ntBASIC13.78□□□□□ -0.2
LTAP01374 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.78□□□□□ -0.2
LTAP01374 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTAP01374 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
LTAP01374 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LTAP01374 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
LTAP01374 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LTAP01374 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LTAP01374 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.78□□□□□ -0.2
LTAP01374 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LTAP01374 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.78□□□□□ -0.2
LTAP01374 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.78□□□□□ -0.2
LTAP01374 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.78□□□□□ -0.2
LTAP01374 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
LTAP01374 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.78□□□□□ -0.2
LTAP01374 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LTAP01374 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
LTAP01374 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LTAP01374 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LTAP01374 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LTAP01374 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.77□□□□□ -0.21
LTAP01374 AC026271.2-201ENST00000428091 497 ntBASIC13.77□□□□□ -0.21
LTAP01374 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LTAP01374 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LTAP01374 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LTAP01374 GUSBP6-202ENST00000438529 1198 ntBASIC13.77□□□□□ -0.21
LTAP01374 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LTAP01374 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.77□□□□□ -0.21
LTAP01374 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LTAP01374 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LTAP01374 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LTAP01374 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LTAP01374 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LTAP01374 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.77□□□□□ -0.21
LTAP01374 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LTAP01374 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LTAP01374 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
LTAP01374 AC083880.1-201ENST00000608266 535 ntBASIC13.77□□□□□ -0.21
LTAP01374 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.77□□□□□ -0.21
LTAP01374 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LTAP01374 AC131212.4-201ENST00000623606 975 ntBASIC13.77□□□□□ -0.21
LTAP01374 AC011676.5-201ENST00000624864 2660 ntBASIC13.77□□□□□ -0.21
LTAP01374 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LTAP01374 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LTAP01374 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LTAP01374 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LTAP01374 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LTAP01374 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LTAP01374 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LTAP01374 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.76□□□□□ -0.21
LTAP01374 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.76□□□□□ -0.21
LTAP01374 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LTAP01374 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LTAP01374 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LTAP01374 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LTAP01374 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LTAP01374 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LTAP01374 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LTAP01374 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.76□□□□□ -0.21
LTAP01374 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LTAP01374 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LTAP01374 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms