Protein–RNA interactions for Protein: O96020

CCNE2, G1/S-specific cyclin-E2, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE2O96020 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.31■□□□□ 0.84
CCNE2O96020 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.31■□□□□ 0.84
CCNE2O96020 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.31■□□□□ 0.84
CCNE2O96020 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.31■□□□□ 0.84
CCNE2O96020 AC246785.2-201ENST00000432512 513 ntBASIC20.31■□□□□ 0.84
CCNE2O96020 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCNE2O96020 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.31■□□□□ 0.84
CCNE2O96020 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.31■□□□□ 0.84
CCNE2O96020 Z69720.1-201ENST00000601483 472 ntBASIC20.31■□□□□ 0.84
CCNE2O96020 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CCNE2O96020 AC009154.2-201ENST00000621177 724 ntBASIC20.31■□□□□ 0.84
CCNE2O96020 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.31■□□□□ 0.84
CCNE2O96020 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
CCNE2O96020 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.31■□□□□ 0.84
CCNE2O96020 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCNE2O96020 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCNE2O96020 NSUN5P1-202ENST00000421140 1535 ntBASIC20.31■□□□□ 0.84
CCNE2O96020 NSUN5P2-203ENST00000457352 1529 ntBASIC20.31■□□□□ 0.84
CCNE2O96020 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCNE2O96020 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCNE2O96020 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCNE2O96020 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCNE2O96020 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCNE2O96020 PHGDH-209ENST00000641074 1780 ntBASIC20.31■□□□□ 0.84
CCNE2O96020 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCNE2O96020 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CCNE2O96020 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCNE2O96020 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.3■□□□□ 0.84
CCNE2O96020 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
CCNE2O96020 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCNE2O96020 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCNE2O96020 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.3■□□□□ 0.84
CCNE2O96020 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCNE2O96020 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCNE2O96020 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCNE2O96020 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCNE2O96020 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCNE2O96020 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCNE2O96020 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCNE2O96020 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCNE2O96020 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CCNE2O96020 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.3■□□□□ 0.84
CCNE2O96020 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.3■□□□□ 0.84
CCNE2O96020 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.3■□□□□ 0.84
CCNE2O96020 AC011840.4-201ENST00000578471 627 ntBASIC20.3■□□□□ 0.84
CCNE2O96020 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.3■□□□□ 0.84
CCNE2O96020 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.3■□□□□ 0.84
CCNE2O96020 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCNE2O96020 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.3■□□□□ 0.84
CCNE2O96020 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CCNE2O96020 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCNE2O96020 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.3■□□□□ 0.84
CCNE2O96020 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CCNE2O96020 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCNE2O96020 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCNE2O96020 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCNE2O96020 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCNE2O96020 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCNE2O96020 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCNE2O96020 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCNE2O96020 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCNE2O96020 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCNE2O96020 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCNE2O96020 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CCNE2O96020 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.29■□□□□ 0.84
CCNE2O96020 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.29■□□□□ 0.84
CCNE2O96020 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.29■□□□□ 0.84
CCNE2O96020 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.29■□□□□ 0.84
CCNE2O96020 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCNE2O96020 AC099336.1-202ENST00000602961 463 ntBASIC20.29■□□□□ 0.84
CCNE2O96020 AC138894.3-201ENST00000603787 634 ntBASIC20.29■□□□□ 0.84
CCNE2O96020 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCNE2O96020 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.29■□□□□ 0.84
CCNE2O96020 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCNE2O96020 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCNE2O96020 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCNE2O96020 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCNE2O96020 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCNE2O96020 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCNE2O96020 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.29■□□□□ 0.84
CCNE2O96020 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCNE2O96020 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCNE2O96020 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCNE2O96020 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.29■□□□□ 0.84
CCNE2O96020 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.29■□□□□ 0.84
CCNE2O96020 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.29■□□□□ 0.84
CCNE2O96020 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCNE2O96020 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CCNE2O96020 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.28■□□□□ 0.84
CCNE2O96020 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCNE2O96020 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCNE2O96020 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCNE2O96020 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCNE2O96020 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCNE2O96020 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCNE2O96020 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCNE2O96020 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CCNE2O96020 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.28■□□□□ 0.84
CCNE2O96020 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCNE2O96020 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms