Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TOMM40O96008 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TOMM40O96008 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TOMM40O96008 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.34□□□□□ -0.11
TOMM40O96008 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.34□□□□□ -0.11
TOMM40O96008 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.34□□□□□ -0.11
TOMM40O96008 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.34□□□□□ -0.11
TOMM40O96008 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TOMM40O96008 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.34□□□□□ -0.11
TOMM40O96008 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TOMM40O96008 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.34□□□□□ -0.11
TOMM40O96008 NUDT16P1-203ENST00000513809 620 ntBASIC14.34□□□□□ -0.11
TOMM40O96008 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.34□□□□□ -0.11
TOMM40O96008 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.34□□□□□ -0.11
TOMM40O96008 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.34□□□□□ -0.11
TOMM40O96008 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TOMM40O96008 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
TOMM40O96008 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.34□□□□□ -0.11
TOMM40O96008 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TOMM40O96008 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TOMM40O96008 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TOMM40O96008 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
TOMM40O96008 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TOMM40O96008 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TOMM40O96008 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TOMM40O96008 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TOMM40O96008 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TOMM40O96008 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TOMM40O96008 GPAT2P1-201ENST00000444924 1672 ntBASIC14.33□□□□□ -0.11
TOMM40O96008 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TOMM40O96008 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TOMM40O96008 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.33□□□□□ -0.12
TOMM40O96008 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TOMM40O96008 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TOMM40O96008 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TOMM40O96008 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TOMM40O96008 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.33□□□□□ -0.12
TOMM40O96008 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TOMM40O96008 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TOMM40O96008 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TOMM40O96008 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TOMM40O96008 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TOMM40O96008 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TOMM40O96008 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.33□□□□□ -0.12
TOMM40O96008 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TOMM40O96008 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.33□□□□□ -0.12
TOMM40O96008 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.33□□□□□ -0.12
TOMM40O96008 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.33□□□□□ -0.12
TOMM40O96008 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.33□□□□□ -0.12
TOMM40O96008 AP001412.1-201ENST00000608405 714 ntBASIC14.33□□□□□ -0.12
TOMM40O96008 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TOMM40O96008 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.33□□□□□ -0.12
TOMM40O96008 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TOMM40O96008 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
TOMM40O96008 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TOMM40O96008 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.33□□□□□ -0.12
TOMM40O96008 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TOMM40O96008 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TOMM40O96008 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.33□□□□□ -0.12
TOMM40O96008 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
TOMM40O96008 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.33□□□□□ -0.12
TOMM40O96008 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TOMM40O96008 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TOMM40O96008 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
TOMM40O96008 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TOMM40O96008 ESPNP-201ENST00000270691 2015 ntBASIC14.32□□□□□ -0.12
TOMM40O96008 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TOMM40O96008 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TOMM40O96008 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.32□□□□□ -0.12
TOMM40O96008 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TOMM40O96008 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.32□□□□□ -0.12
TOMM40O96008 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.32□□□□□ -0.12
TOMM40O96008 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TOMM40O96008 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TOMM40O96008 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms