Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE6O95741 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE6O95741 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE6O95741 MIR662-201ENST00000384847 95 ntBASIC17.94■□□□□ 0.46
CPNE6O95741 MIR564-202ENST00000385049 94 ntBASIC17.94■□□□□ 0.46
CPNE6O95741 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CPNE6O95741 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.94■□□□□ 0.46
CPNE6O95741 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.94■□□□□ 0.46
CPNE6O95741 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.94■□□□□ 0.46
CPNE6O95741 KRT8P26-201ENST00000534154 1276 ntBASIC17.94■□□□□ 0.46
CPNE6O95741 AC010240.3-201ENST00000607688 395 ntBASIC17.94■□□□□ 0.46
CPNE6O95741 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.94■□□□□ 0.46
CPNE6O95741 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.94■□□□□ 0.46
CPNE6O95741 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.94■□□□□ 0.46
CPNE6O95741 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE6O95741 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE6O95741 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE6O95741 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE6O95741 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE6O95741 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE6O95741 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE6O95741 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE6O95741 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.94■□□□□ 0.46
CPNE6O95741 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.94■□□□□ 0.46
CPNE6O95741 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE6O95741 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE6O95741 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE6O95741 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE6O95741 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.93■□□□□ 0.46
CPNE6O95741 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE6O95741 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CPNE6O95741 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.93■□□□□ 0.46
CPNE6O95741 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE6O95741 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE6O95741 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE6O95741 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE6O95741 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE6O95741 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE6O95741 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CPNE6O95741 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.93■□□□□ 0.46
CPNE6O95741 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.93■□□□□ 0.46
CPNE6O95741 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.93■□□□□ 0.46
CPNE6O95741 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.93■□□□□ 0.46
CPNE6O95741 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.93■□□□□ 0.46
CPNE6O95741 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.93■□□□□ 0.46
CPNE6O95741 AC012313.10-201ENST00000623509 926 ntBASIC17.93■□□□□ 0.46
CPNE6O95741 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE6O95741 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE6O95741 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.93■□□□□ 0.46
CPNE6O95741 WIZP1-201ENST00000531444 2299 ntBASIC17.93■□□□□ 0.46
CPNE6O95741 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.93■□□□□ 0.46
CPNE6O95741 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.93■□□□□ 0.46
CPNE6O95741 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.93■□□□□ 0.46
CPNE6O95741 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE6O95741 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE6O95741 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE6O95741 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CPNE6O95741 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE6O95741 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CPNE6O95741 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.92■□□□□ 0.46
CPNE6O95741 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE6O95741 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.92■□□□□ 0.46
CPNE6O95741 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE6O95741 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE6O95741 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE6O95741 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE6O95741 FP475955.4-201ENST00000623131 1990 ntBASIC17.92■□□□□ 0.46
CPNE6O95741 AL161938.1-201ENST00000569833 2180 ntBASIC17.92■□□□□ 0.46
CPNE6O95741 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.92■□□□□ 0.46
CPNE6O95741 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE6O95741 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE6O95741 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE6O95741 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE6O95741 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE6O95741 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.92■□□□□ 0.46
CPNE6O95741 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.92■□□□□ 0.46
CPNE6O95741 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE6O95741 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.92■□□□□ 0.46
CPNE6O95741 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.92■□□□□ 0.46
CPNE6O95741 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE6O95741 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE6O95741 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE6O95741 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE6O95741 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.92■□□□□ 0.46
CPNE6O95741 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE6O95741 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE6O95741 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE6O95741 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.92■□□□□ 0.46
CPNE6O95741 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE6O95741 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE6O95741 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CPNE6O95741 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.91■□□□□ 0.46
CPNE6O95741 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE6O95741 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE6O95741 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CPNE6O95741 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE6O95741 AC034236.2-201ENST00000606662 1610 ntBASIC17.91■□□□□ 0.46
CPNE6O95741 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CPNE6O95741 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE6O95741 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms