Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LTN1O94822 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LTN1O94822 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
LTN1O94822 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC24.14■■□□□ 1.46
LTN1O94822 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
LTN1O94822 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
LTN1O94822 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC24.14■■□□□ 1.46
LTN1O94822 RNF151-202ENST00000569210 853 ntTSL 2 BASIC24.14■■□□□ 1.46
LTN1O94822 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC24.14■■□□□ 1.46
LTN1O94822 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC24.14■■□□□ 1.46
LTN1O94822 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
LTN1O94822 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
LTN1O94822 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LTN1O94822 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
LTN1O94822 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
LTN1O94822 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LTN1O94822 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LTN1O94822 ESPNP-201ENST00000270691 2015 ntBASIC24.14■■□□□ 1.45
LTN1O94822 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
LTN1O94822 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC24.14■■□□□ 1.45
LTN1O94822 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LTN1O94822 AL356309.3-201ENST00000624132 1934 ntBASIC24.14■■□□□ 1.45
LTN1O94822 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LTN1O94822 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LTN1O94822 MED15P5-201ENST00000423150 992 ntBASIC24.14■■□□□ 1.45
LTN1O94822 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC24.14■■□□□ 1.45
LTN1O94822 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC24.14■■□□□ 1.45
LTN1O94822 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC24.13■■□□□ 1.45
LTN1O94822 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
LTN1O94822 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
LTN1O94822 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
LTN1O94822 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
LTN1O94822 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC24.13■■□□□ 1.45
LTN1O94822 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC24.13■■□□□ 1.45
LTN1O94822 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC24.13■■□□□ 1.45
LTN1O94822 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
LTN1O94822 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC24.13■■□□□ 1.45
LTN1O94822 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC24.13■■□□□ 1.45
LTN1O94822 AC079776.2-201ENST00000641154 1609 ntBASIC24.13■■□□□ 1.45
LTN1O94822 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
LTN1O94822 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC24.13■■□□□ 1.45
LTN1O94822 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
LTN1O94822 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
LTN1O94822 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
LTN1O94822 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
LTN1O94822 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
LTN1O94822 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC24.12■■□□□ 1.45
LTN1O94822 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
LTN1O94822 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC24.12■■□□□ 1.45
LTN1O94822 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC24.12■■□□□ 1.45
LTN1O94822 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
LTN1O94822 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC24.12■■□□□ 1.45
LTN1O94822 LBH-204ENST00000406087 559 ntTSL 4 BASIC24.12■■□□□ 1.45
LTN1O94822 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC24.12■■□□□ 1.45
LTN1O94822 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
LTN1O94822 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC24.12■■□□□ 1.45
LTN1O94822 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC24.12■■□□□ 1.45
LTN1O94822 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
LTN1O94822 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
LTN1O94822 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
LTN1O94822 PMS2P7-201ENST00000506558 1336 ntBASIC24.12■■□□□ 1.45
LTN1O94822 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
LTN1O94822 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
LTN1O94822 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
LTN1O94822 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
LTN1O94822 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
LTN1O94822 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
LTN1O94822 AC007967.2-201ENST00000432613 625 ntBASIC24.11■■□□□ 1.45
LTN1O94822 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC24.11■■□□□ 1.45
LTN1O94822 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
LTN1O94822 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC24.11■■□□□ 1.45
LTN1O94822 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC24.11■■□□□ 1.45
LTN1O94822 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
LTN1O94822 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LTN1O94822 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
LTN1O94822 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
LTN1O94822 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC24.11■■□□□ 1.45
LTN1O94822 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LTN1O94822 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LTN1O94822 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
LTN1O94822 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LTN1O94822 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC24.11■■□□□ 1.45
LTN1O94822 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
LTN1O94822 RNA5SP415-201ENST00000517246 115 ntBASIC24.11■■□□□ 1.45
LTN1O94822 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC24.11■■□□□ 1.45
LTN1O94822 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC24.11■■□□□ 1.45
LTN1O94822 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
LTN1O94822 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
LTN1O94822 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LTN1O94822 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC24.1■■□□□ 1.45
LTN1O94822 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LTN1O94822 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LTN1O94822 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LTN1O94822 FUOM-202ENST00000368551 628 ntTSL 3 BASIC24.1■■□□□ 1.45
LTN1O94822 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LTN1O94822 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
LTN1O94822 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
LTN1O94822 AP002414.3-201ENST00000589352 1468 ntBASIC24.1■■□□□ 1.45
LTN1O94822 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
LTN1O94822 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms