Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BEST1O76090 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
BEST1O76090 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
BEST1O76090 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.16■□□□□ 0.66
BEST1O76090 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BEST1O76090 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.16■□□□□ 0.66
BEST1O76090 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BEST1O76090 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BEST1O76090 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BEST1O76090 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BEST1O76090 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BEST1O76090 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.16■□□□□ 0.66
BEST1O76090 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.16■□□□□ 0.66
BEST1O76090 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.16■□□□□ 0.66
BEST1O76090 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
BEST1O76090 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BEST1O76090 LINC00167-201ENST00000530583 1419 ntBASIC19.16■□□□□ 0.66
BEST1O76090 AC093677.2-201ENST00000600169 1863 ntBASIC19.16■□□□□ 0.66
BEST1O76090 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
BEST1O76090 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BEST1O76090 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
BEST1O76090 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BEST1O76090 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BEST1O76090 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
BEST1O76090 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BEST1O76090 HCG4P8-203ENST00000443049 980 ntBASIC19.15■□□□□ 0.66
BEST1O76090 RN7SL606P-201ENST00000472779 293 ntBASIC19.15■□□□□ 0.66
BEST1O76090 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.15■□□□□ 0.66
BEST1O76090 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BEST1O76090 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.15■□□□□ 0.66
BEST1O76090 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.15■□□□□ 0.66
BEST1O76090 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BEST1O76090 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.15■□□□□ 0.66
BEST1O76090 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.15■□□□□ 0.66
BEST1O76090 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.15■□□□□ 0.66
BEST1O76090 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
BEST1O76090 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BEST1O76090 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.15■□□□□ 0.66
BEST1O76090 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
BEST1O76090 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BEST1O76090 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BEST1O76090 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.14■□□□□ 0.66
BEST1O76090 AC132938.6-201ENST00000623828 1655 ntBASIC19.14■□□□□ 0.66
BEST1O76090 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.14■□□□□ 0.66
BEST1O76090 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
BEST1O76090 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.14■□□□□ 0.65
BEST1O76090 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.14■□□□□ 0.65
BEST1O76090 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BEST1O76090 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BEST1O76090 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
BEST1O76090 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.14■□□□□ 0.65
BEST1O76090 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BEST1O76090 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.14■□□□□ 0.65
BEST1O76090 TPSP2-201ENST00000561760 610 ntBASIC19.14■□□□□ 0.65
BEST1O76090 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
BEST1O76090 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
BEST1O76090 IGHV3-41-201ENST00000613121 348 ntBASIC19.14■□□□□ 0.65
BEST1O76090 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
BEST1O76090 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BEST1O76090 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BEST1O76090 KRT18P1-202ENST00000452408 1331 ntBASIC19.14■□□□□ 0.65
BEST1O76090 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BEST1O76090 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BEST1O76090 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BEST1O76090 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BEST1O76090 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.14■□□□□ 0.65
BEST1O76090 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.14■□□□□ 0.65
BEST1O76090 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
BEST1O76090 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BEST1O76090 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BEST1O76090 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BEST1O76090 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST1O76090 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST1O76090 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST1O76090 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
BEST1O76090 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST1O76090 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
BEST1O76090 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.13■□□□□ 0.65
BEST1O76090 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST1O76090 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.13■□□□□ 0.65
BEST1O76090 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BEST1O76090 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST1O76090 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST1O76090 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST1O76090 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST1O76090 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
BEST1O76090 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.13■□□□□ 0.65
BEST1O76090 AC124864.1-201ENST00000623408 392 ntBASIC19.13■□□□□ 0.65
BEST1O76090 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST1O76090 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BEST1O76090 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BEST1O76090 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BEST1O76090 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
BEST1O76090 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
BEST1O76090 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.13■□□□□ 0.65
BEST1O76090 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BEST1O76090 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BEST1O76090 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST1O76090 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST1O76090 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms