Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CLDN11O75508 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN11O75508 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.65■□□□□ 0.58
CLDN11O75508 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.65■□□□□ 0.58
CLDN11O75508 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN11O75508 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN11O75508 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.65■□□□□ 0.58
CLDN11O75508 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.65■□□□□ 0.58
CLDN11O75508 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CLDN11O75508 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN11O75508 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLDN11O75508 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN11O75508 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN11O75508 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN11O75508 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.65■□□□□ 0.58
CLDN11O75508 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN11O75508 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN11O75508 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CLDN11O75508 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN11O75508 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN11O75508 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLDN11O75508 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.58
CLDN11O75508 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CLDN11O75508 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLDN11O75508 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN11O75508 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN11O75508 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.64■□□□□ 0.57
CLDN11O75508 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN11O75508 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN11O75508 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CLDN11O75508 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CLDN11O75508 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.64■□□□□ 0.57
CLDN11O75508 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.64■□□□□ 0.57
CLDN11O75508 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.64■□□□□ 0.57
CLDN11O75508 GUSBP12-201ENST00000513727 720 ntBASIC18.64■□□□□ 0.57
CLDN11O75508 NPAP1P7-201ENST00000613027 823 ntBASIC18.64■□□□□ 0.57
CLDN11O75508 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.64■□□□□ 0.57
CLDN11O75508 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN11O75508 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN11O75508 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN11O75508 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN11O75508 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN11O75508 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN11O75508 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN11O75508 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN11O75508 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN11O75508 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN11O75508 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN11O75508 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN11O75508 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN11O75508 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
CLDN11O75508 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN11O75508 AC090164.3-201ENST00000610780 2143 ntBASIC18.63■□□□□ 0.57
CLDN11O75508 IGHV3-41-201ENST00000613121 348 ntBASIC18.63■□□□□ 0.57
CLDN11O75508 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN11O75508 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CLDN11O75508 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN11O75508 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN11O75508 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN11O75508 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN11O75508 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN11O75508 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN11O75508 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN11O75508 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN11O75508 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN11O75508 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN11O75508 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.62■□□□□ 0.57
CLDN11O75508 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN11O75508 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN11O75508 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN11O75508 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.62■□□□□ 0.57
CLDN11O75508 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN11O75508 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN11O75508 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.62■□□□□ 0.57
CLDN11O75508 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN11O75508 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.62■□□□□ 0.57
CLDN11O75508 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN11O75508 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CLDN11O75508 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN11O75508 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN11O75508 LINC00602-201ENST00000629776 2065 ntBASIC18.62■□□□□ 0.57
CLDN11O75508 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN11O75508 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN11O75508 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN11O75508 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN11O75508 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN11O75508 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN11O75508 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN11O75508 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLDN11O75508 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLDN11O75508 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN11O75508 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLDN11O75508 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN11O75508 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN11O75508 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CLDN11O75508 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN11O75508 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN11O75508 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN11O75508 KRT18P1-202ENST00000452408 1331 ntBASIC18.61■□□□□ 0.57
CLDN11O75508 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms