Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PRPF40AO75400 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.28■■□□□ 1
PRPF40AO75400 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRPF40AO75400 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.28■■□□□ 1
PRPF40AO75400 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.28■■□□□ 1
PRPF40AO75400 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRPF40AO75400 PRSS44-201ENST00000515154 1146 ntBASIC21.28■■□□□ 1
PRPF40AO75400 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.28■■□□□ 1
PRPF40AO75400 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
PRPF40AO75400 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PRPF40AO75400 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.28■■□□□ 1
PRPF40AO75400 AL023875.1-201ENST00000640777 796 ntBASIC21.28■■□□□ 1
PRPF40AO75400 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PRPF40AO75400 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRPF40AO75400 AC099343.3-201ENST00000605834 2503 ntBASIC21.28■■□□□ 1
PRPF40AO75400 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PRPF40AO75400 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRPF40AO75400 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.28■■□□□ 1
PRPF40AO75400 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRPF40AO75400 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRPF40AO75400 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PRPF40AO75400 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRPF40AO75400 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRPF40AO75400 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PRPF40AO75400 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PRPF40AO75400 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRPF40AO75400 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.27■■□□□ 1
PRPF40AO75400 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PRPF40AO75400 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.27■■□□□ 1
PRPF40AO75400 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.27■■□□□ 1
PRPF40AO75400 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRPF40AO75400 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRPF40AO75400 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRPF40AO75400 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRPF40AO75400 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRPF40AO75400 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.27■■□□□ 1
PRPF40AO75400 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PRPF40AO75400 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRPF40AO75400 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
PRPF40AO75400 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.27■■□□□ 1
PRPF40AO75400 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.27■■□□□ 1
PRPF40AO75400 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.27■■□□□ 1
PRPF40AO75400 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.27■■□□□ 1
PRPF40AO75400 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.27■■□□□ 1
PRPF40AO75400 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PRPF40AO75400 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PRPF40AO75400 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.27■■□□□ 1
PRPF40AO75400 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.27■■□□□ 1
PRPF40AO75400 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PRPF40AO75400 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
PRPF40AO75400 PHGDH-209ENST00000641074 1780 ntBASIC21.27■■□□□ 1
PRPF40AO75400 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRPF40AO75400 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PRPF40AO75400 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PRPF40AO75400 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.27■□□□□ 0.99
PRPF40AO75400 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
PRPF40AO75400 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PRPF40AO75400 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PRPF40AO75400 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PRPF40AO75400 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PRPF40AO75400 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRPF40AO75400 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRPF40AO75400 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PRPF40AO75400 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
PRPF40AO75400 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRPF40AO75400 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRPF40AO75400 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRPF40AO75400 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PRPF40AO75400 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRPF40AO75400 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.26■□□□□ 0.99
PRPF40AO75400 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.26■□□□□ 0.99
PRPF40AO75400 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.26■□□□□ 0.99
PRPF40AO75400 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRPF40AO75400 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.26■□□□□ 0.99
PRPF40AO75400 AC124016.1-201ENST00000609552 612 ntBASIC21.26■□□□□ 0.99
PRPF40AO75400 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PRPF40AO75400 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
PRPF40AO75400 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.26■□□□□ 0.99
PRPF40AO75400 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.26■□□□□ 0.99
PRPF40AO75400 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRPF40AO75400 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PRPF40AO75400 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRPF40AO75400 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PRPF40AO75400 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PRPF40AO75400 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRPF40AO75400 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
PRPF40AO75400 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.25■□□□□ 0.99
PRPF40AO75400 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRPF40AO75400 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.25■□□□□ 0.99
PRPF40AO75400 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PRPF40AO75400 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRPF40AO75400 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRPF40AO75400 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PRPF40AO75400 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRPF40AO75400 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PRPF40AO75400 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRPF40AO75400 KRASP1-201ENST00000407852 552 ntBASIC21.25■□□□□ 0.99
PRPF40AO75400 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.25■□□□□ 0.99
PRPF40AO75400 UBE2SP1-201ENST00000450587 669 ntBASIC21.25■□□□□ 0.99
PRPF40AO75400 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms