Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 AP004607.4-201ENST00000530158 1459 ntBASIC16.37■□□□□ 0.21
PFDN1O60925 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 BHLHE23-202ENST00000612929 1109 ntBASIC16.37■□□□□ 0.21
PFDN1O60925 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PFDN1O60925 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.37■□□□□ 0.21
PFDN1O60925 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.37■□□□□ 0.21
PFDN1O60925 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.37■□□□□ 0.21
PFDN1O60925 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN1O60925 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN1O60925 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
PFDN1O60925 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN1O60925 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN1O60925 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN1O60925 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN1O60925 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.36■□□□□ 0.21
PFDN1O60925 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PFDN1O60925 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN1O60925 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PFDN1O60925 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.36■□□□□ 0.21
PFDN1O60925 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN1O60925 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PFDN1O60925 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN1O60925 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.36■□□□□ 0.21
PFDN1O60925 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN1O60925 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN1O60925 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PFDN1O60925 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN1O60925 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN1O60925 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN1O60925 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN1O60925 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN1O60925 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN1O60925 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PFDN1O60925 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.35■□□□□ 0.21
PFDN1O60925 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN1O60925 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN1O60925 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.35■□□□□ 0.21
PFDN1O60925 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.35■□□□□ 0.21
PFDN1O60925 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN1O60925 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN1O60925 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN1O60925 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.35■□□□□ 0.21
PFDN1O60925 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN1O60925 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
PFDN1O60925 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN1O60925 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
PFDN1O60925 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PFDN1O60925 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.35■□□□□ 0.21
PFDN1O60925 AC083906.6-201ENST00000641366 219 ntBASIC16.35■□□□□ 0.21
PFDN1O60925 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN1O60925 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN1O60925 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN1O60925 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PFDN1O60925 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN1O60925 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.35■□□□□ 0.21
PFDN1O60925 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PFDN1O60925 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN1O60925 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN1O60925 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN1O60925 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN1O60925 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN1O60925 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN1O60925 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.35■□□□□ 0.21
PFDN1O60925 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN1O60925 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN1O60925 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.35■□□□□ 0.21
PFDN1O60925 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN1O60925 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PFDN1O60925 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PFDN1O60925 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PFDN1O60925 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PFDN1O60925 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PFDN1O60925 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PFDN1O60925 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PFDN1O60925 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PFDN1O60925 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms