Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.11■□□□□ 0.33
HCN1O60741 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCN1O60741 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCN1O60741 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCN1O60741 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCN1O60741 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HCN1O60741 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.11■□□□□ 0.33
HCN1O60741 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.11■□□□□ 0.33
HCN1O60741 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.11■□□□□ 0.33
HCN1O60741 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.11■□□□□ 0.33
HCN1O60741 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HCN1O60741 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.11■□□□□ 0.33
HCN1O60741 AC011558.1-201ENST00000623459 338 ntBASIC17.11■□□□□ 0.33
HCN1O60741 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.11■□□□□ 0.33
HCN1O60741 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HCN1O60741 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCN1O60741 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.11■□□□□ 0.33
HCN1O60741 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HCN1O60741 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.11■□□□□ 0.33
HCN1O60741 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.11■□□□□ 0.33
HCN1O60741 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCN1O60741 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCN1O60741 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.11■□□□□ 0.33
HCN1O60741 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HCN1O60741 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCN1O60741 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
HCN1O60741 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HCN1O60741 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.1■□□□□ 0.33
HCN1O60741 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCN1O60741 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCN1O60741 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.1■□□□□ 0.33
HCN1O60741 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.1■□□□□ 0.33
HCN1O60741 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCN1O60741 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCN1O60741 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HCN1O60741 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCN1O60741 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HCN1O60741 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.1■□□□□ 0.33
HCN1O60741 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCN1O60741 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.1■□□□□ 0.33
HCN1O60741 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.1■□□□□ 0.33
HCN1O60741 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCN1O60741 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HCN1O60741 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HCN1O60741 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCN1O60741 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HCN1O60741 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HCN1O60741 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.1■□□□□ 0.33
HCN1O60741 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCN1O60741 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCN1O60741 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HCN1O60741 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCN1O60741 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCN1O60741 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.1■□□□□ 0.33
HCN1O60741 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.1■□□□□ 0.33
HCN1O60741 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCN1O60741 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCN1O60741 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCN1O60741 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCN1O60741 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCN1O60741 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCN1O60741 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCN1O60741 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCN1O60741 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCN1O60741 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCN1O60741 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.09■□□□□ 0.33
HCN1O60741 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.09■□□□□ 0.33
HCN1O60741 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.09■□□□□ 0.33
HCN1O60741 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCN1O60741 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.09■□□□□ 0.33
HCN1O60741 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.09■□□□□ 0.33
HCN1O60741 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.09■□□□□ 0.33
HCN1O60741 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.09■□□□□ 0.33
HCN1O60741 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.09■□□□□ 0.33
HCN1O60741 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HCN1O60741 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.09■□□□□ 0.33
HCN1O60741 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCN1O60741 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCN1O60741 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HCN1O60741 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCN1O60741 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.09■□□□□ 0.33
HCN1O60741 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
HCN1O60741 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCN1O60741 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCN1O60741 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCN1O60741 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.09■□□□□ 0.33
HCN1O60741 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.09■□□□□ 0.33
HCN1O60741 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.09■□□□□ 0.33
HCN1O60741 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCN1O60741 FZD10-202ENST00000539839 3282 ntBASIC17.09■□□□□ 0.33
HCN1O60741 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
HCN1O60741 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.09■□□□□ 0.33
HCN1O60741 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
HCN1O60741 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HCN1O60741 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.08■□□□□ 0.33
HCN1O60741 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HCN1O60741 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.08■□□□□ 0.33
HCN1O60741 AC068880.1-201ENST00000507289 2297 ntBASIC17.08■□□□□ 0.33
HCN1O60741 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HCN1O60741 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms