Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNAI2O43623 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNAI2O43623 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC13.7□□□□□ -0.22
SNAI2O43623 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNAI2O43623 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
SNAI2O43623 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC13.7□□□□□ -0.22
SNAI2O43623 AC026185.1-201ENST00000445748 174 ntBASIC13.7□□□□□ -0.22
SNAI2O43623 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.7□□□□□ -0.22
SNAI2O43623 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SNAI2O43623 C1QL1P1-201ENST00000568105 661 ntBASIC13.7□□□□□ -0.22
SNAI2O43623 AC022517.1-201ENST00000592429 346 ntBASIC13.7□□□□□ -0.22
SNAI2O43623 MYC-209ENST00000641252 345 ntBASIC13.7□□□□□ -0.22
SNAI2O43623 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNAI2O43623 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC13.7□□□□□ -0.22
SNAI2O43623 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SNAI2O43623 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNAI2O43623 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.7□□□□□ -0.22
SNAI2O43623 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNAI2O43623 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNAI2O43623 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.7□□□□□ -0.22
SNAI2O43623 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.7□□□□□ -0.22
SNAI2O43623 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
SNAI2O43623 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNAI2O43623 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SNAI2O43623 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.69□□□□□ -0.22
SNAI2O43623 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SNAI2O43623 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 AC135776.1-201ENST00000319817 2481 ntBASIC13.69□□□□□ -0.22
SNAI2O43623 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SNAI2O43623 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SNAI2O43623 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SNAI2O43623 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
SNAI2O43623 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.69□□□□□ -0.22
SNAI2O43623 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.69□□□□□ -0.22
SNAI2O43623 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.69□□□□□ -0.22
SNAI2O43623 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
SNAI2O43623 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.69□□□□□ -0.22
SNAI2O43623 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.69□□□□□ -0.22
SNAI2O43623 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.69□□□□□ -0.22
SNAI2O43623 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.69□□□□□ -0.22
SNAI2O43623 RARRES2P6-201ENST00000567333 442 ntBASIC13.69□□□□□ -0.22
SNAI2O43623 AC008687.6-201ENST00000596318 630 ntBASIC13.69□□□□□ -0.22
SNAI2O43623 AL121832.2-201ENST00000610979 668 ntBASIC13.69□□□□□ -0.22
SNAI2O43623 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.69□□□□□ -0.22
SNAI2O43623 ANKRD20A6P-201ENST00000618763 204 ntBASIC13.69□□□□□ -0.22
SNAI2O43623 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SNAI2O43623 KRT8P45-201ENST00000414328 1447 ntBASIC13.69□□□□□ -0.22
SNAI2O43623 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SNAI2O43623 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
SNAI2O43623 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.69□□□□□ -0.22
SNAI2O43623 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
SNAI2O43623 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
SNAI2O43623 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
SNAI2O43623 KRT8P41-201ENST00000533985 1514 ntBASIC13.69□□□□□ -0.22
SNAI2O43623 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
SNAI2O43623 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.69□□□□□ -0.22
SNAI2O43623 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SNAI2O43623 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.69□□□□□ -0.22
SNAI2O43623 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SNAI2O43623 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNAI2O43623 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.68□□□□□ -0.22
SNAI2O43623 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNAI2O43623 KRT8P32-201ENST00000512863 1461 ntBASIC13.68□□□□□ -0.22
SNAI2O43623 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.68□□□□□ -0.22
SNAI2O43623 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.68□□□□□ -0.22
SNAI2O43623 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.68□□□□□ -0.22
SNAI2O43623 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNAI2O43623 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.68□□□□□ -0.22
SNAI2O43623 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNAI2O43623 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SNAI2O43623 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNAI2O43623 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNAI2O43623 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNAI2O43623 AL391005.1-201ENST00000623953 2435 ntBASIC13.68□□□□□ -0.22
SNAI2O43623 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.68□□□□□ -0.22
SNAI2O43623 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNAI2O43623 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms