Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
XRCC2O43543 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
XRCC2O43543 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.91■□□□□ 0.14
XRCC2O43543 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
XRCC2O43543 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.91■□□□□ 0.14
XRCC2O43543 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
XRCC2O43543 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.91■□□□□ 0.14
XRCC2O43543 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
XRCC2O43543 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
XRCC2O43543 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
XRCC2O43543 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
XRCC2O43543 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
XRCC2O43543 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 AC135776.1-201ENST00000319817 2481 ntBASIC15.9■□□□□ 0.14
XRCC2O43543 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
XRCC2O43543 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.9■□□□□ 0.14
XRCC2O43543 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.9■□□□□ 0.14
XRCC2O43543 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.9■□□□□ 0.14
XRCC2O43543 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
XRCC2O43543 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.9■□□□□ 0.14
XRCC2O43543 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.9■□□□□ 0.14
XRCC2O43543 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.9■□□□□ 0.14
XRCC2O43543 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 AC066615.1-201ENST00000640911 628 ntBASIC15.9■□□□□ 0.14
XRCC2O43543 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
XRCC2O43543 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.9■□□□□ 0.14
XRCC2O43543 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
XRCC2O43543 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.9■□□□□ 0.14
XRCC2O43543 AC093677.2-201ENST00000600169 1863 ntBASIC15.9■□□□□ 0.14
XRCC2O43543 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
XRCC2O43543 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
XRCC2O43543 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
XRCC2O43543 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC2O43543 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC2O43543 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC2O43543 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC2O43543 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC2O43543 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC2O43543 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC2O43543 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC2O43543 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC2O43543 INGX-201ENST00000359239 846 ntBASIC15.89■□□□□ 0.13
XRCC2O43543 AP000523.1-201ENST00000398242 1049 ntBASIC15.89■□□□□ 0.13
XRCC2O43543 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.89■□□□□ 0.13
XRCC2O43543 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.89■□□□□ 0.13
XRCC2O43543 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.89■□□□□ 0.13
XRCC2O43543 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.89■□□□□ 0.13
XRCC2O43543 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.89■□□□□ 0.13
XRCC2O43543 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.89■□□□□ 0.13
XRCC2O43543 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC2O43543 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC2O43543 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.89■□□□□ 0.13
XRCC2O43543 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC2O43543 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC2O43543 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC2O43543 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC2O43543 KRT18P22-201ENST00000402024 1347 ntBASIC15.89■□□□□ 0.13
XRCC2O43543 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC2O43543 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC2O43543 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
XRCC2O43543 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.89■□□□□ 0.13
XRCC2O43543 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC2O43543 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.89■□□□□ 0.13
XRCC2O43543 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.89■□□□□ 0.13
XRCC2O43543 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
XRCC2O43543 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC2O43543 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.89■□□□□ 0.13
XRCC2O43543 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC2O43543 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.88■□□□□ 0.13
XRCC2O43543 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.88■□□□□ 0.13
XRCC2O43543 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms