Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.82■□□□□ 0.44
HDAC3O15379 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC3O15379 PP12613-201ENST00000424958 2230 ntBASIC17.82■□□□□ 0.44
HDAC3O15379 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC3O15379 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC3O15379 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC3O15379 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HDAC3O15379 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.82■□□□□ 0.44
HDAC3O15379 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HDAC3O15379 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC3O15379 AL353807.1-201ENST00000427475 662 ntBASIC17.82■□□□□ 0.44
HDAC3O15379 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.82■□□□□ 0.44
HDAC3O15379 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.82■□□□□ 0.44
HDAC3O15379 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.82■□□□□ 0.44
HDAC3O15379 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC3O15379 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC3O15379 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.82■□□□□ 0.44
HDAC3O15379 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC3O15379 KRT18P55-202ENST00000578578 1546 ntBASIC17.82■□□□□ 0.44
HDAC3O15379 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC3O15379 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.81■□□□□ 0.44
HDAC3O15379 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC3O15379 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.81■□□□□ 0.44
HDAC3O15379 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC3O15379 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HDAC3O15379 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.81■□□□□ 0.44
HDAC3O15379 SDHAP2-201ENST00000455183 2001 ntBASIC17.81■□□□□ 0.44
HDAC3O15379 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC3O15379 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.81■□□□□ 0.44
HDAC3O15379 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC3O15379 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC3O15379 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.81■□□□□ 0.44
HDAC3O15379 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC3O15379 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC3O15379 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC3O15379 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.81■□□□□ 0.44
HDAC3O15379 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.81■□□□□ 0.44
HDAC3O15379 RN7SL471P-201ENST00000580476 299 ntBASIC17.81■□□□□ 0.44
HDAC3O15379 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.81■□□□□ 0.44
HDAC3O15379 CR392000.1-201ENST00000624770 1228 ntBASIC17.81■□□□□ 0.44
HDAC3O15379 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
HDAC3O15379 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC3O15379 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC3O15379 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC3O15379 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
HDAC3O15379 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC3O15379 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC3O15379 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.81■□□□□ 0.44
HDAC3O15379 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.81■□□□□ 0.44
HDAC3O15379 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC3O15379 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC3O15379 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HDAC3O15379 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HDAC3O15379 GPAT2P1-201ENST00000444924 1672 ntBASIC17.8■□□□□ 0.44
HDAC3O15379 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC3O15379 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC3O15379 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC3O15379 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.8■□□□□ 0.44
HDAC3O15379 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC3O15379 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC3O15379 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC3O15379 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC3O15379 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
HDAC3O15379 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC3O15379 AL355802.2-201ENST00000402069 882 ntBASIC17.8■□□□□ 0.44
HDAC3O15379 AC011506.1-201ENST00000474329 610 ntBASIC17.8■□□□□ 0.44
HDAC3O15379 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.8■□□□□ 0.44
HDAC3O15379 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC3O15379 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HDAC3O15379 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC3O15379 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC3O15379 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.8■□□□□ 0.44
HDAC3O15379 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC3O15379 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HDAC3O15379 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HDAC3O15379 PCDHA12-202ENST00000613593 2588 ntBASIC17.8■□□□□ 0.44
HDAC3O15379 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HDAC3O15379 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.8■□□□□ 0.44
HDAC3O15379 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.8■□□□□ 0.44
HDAC3O15379 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.8■□□□□ 0.44
HDAC3O15379 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HDAC3O15379 AC141586.5-201ENST00000624546 2050 ntBASIC17.79■□□□□ 0.44
HDAC3O15379 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC3O15379 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC3O15379 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC3O15379 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC3O15379 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC3O15379 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC3O15379 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC3O15379 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC3O15379 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.79■□□□□ 0.44
HDAC3O15379 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC3O15379 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC3O15379 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
HDAC3O15379 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.79■□□□□ 0.44
HDAC3O15379 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.79■□□□□ 0.44
HDAC3O15379 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC3O15379 MIR6786-201ENST00000616843 113 ntBASIC17.79■□□□□ 0.44
HDAC3O15379 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HDAC3O15379 AC009102.3-201ENST00000623118 1491 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms