Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC1O15269 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SPTLC1O15269 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SPTLC1O15269 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC1O15269 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC1O15269 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
SPTLC1O15269 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SPTLC1O15269 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC1O15269 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC1O15269 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC1O15269 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.53■□□□□ 0.72
SPTLC1O15269 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC1O15269 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC1O15269 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SPTLC1O15269 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC1O15269 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
SPTLC1O15269 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SPTLC1O15269 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC1O15269 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC1O15269 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC1O15269 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC1O15269 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
SPTLC1O15269 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC1O15269 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC1O15269 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPTLC1O15269 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SPTLC1O15269 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPTLC1O15269 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.52■□□□□ 0.72
SPTLC1O15269 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.52■□□□□ 0.72
SPTLC1O15269 WIZP1-201ENST00000531444 2299 ntBASIC19.52■□□□□ 0.72
SPTLC1O15269 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPTLC1O15269 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.52■□□□□ 0.72
SPTLC1O15269 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SPTLC1O15269 RN7SL606P-201ENST00000472779 293 ntBASIC19.52■□□□□ 0.72
SPTLC1O15269 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SPTLC1O15269 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.52■□□□□ 0.72
SPTLC1O15269 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.52■□□□□ 0.72
SPTLC1O15269 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SPTLC1O15269 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
SPTLC1O15269 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPTLC1O15269 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPTLC1O15269 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.52■□□□□ 0.72
SPTLC1O15269 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPTLC1O15269 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SPTLC1O15269 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.52■□□□□ 0.72
SPTLC1O15269 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SPTLC1O15269 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPTLC1O15269 AC004408.2-201ENST00000623613 2777 ntBASIC19.52■□□□□ 0.72
SPTLC1O15269 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
SPTLC1O15269 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SPTLC1O15269 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
SPTLC1O15269 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SPTLC1O15269 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SPTLC1O15269 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTLC1O15269 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SPTLC1O15269 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTLC1O15269 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTLC1O15269 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTLC1O15269 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTLC1O15269 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SPTLC1O15269 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.51■□□□□ 0.71
SPTLC1O15269 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTLC1O15269 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTLC1O15269 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.51■□□□□ 0.71
SPTLC1O15269 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SPTLC1O15269 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.51■□□□□ 0.71
SPTLC1O15269 DRAXINP1-201ENST00000437611 948 ntBASIC19.51■□□□□ 0.71
SPTLC1O15269 FDX1P1-201ENST00000449115 551 ntBASIC19.51■□□□□ 0.71
SPTLC1O15269 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.51■□□□□ 0.71
SPTLC1O15269 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.51■□□□□ 0.71
SPTLC1O15269 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SPTLC1O15269 AC090616.6-201ENST00000582640 721 ntBASIC19.51■□□□□ 0.71
SPTLC1O15269 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.51■□□□□ 0.71
SPTLC1O15269 IGHV3-41-201ENST00000613121 348 ntBASIC19.51■□□□□ 0.71
SPTLC1O15269 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTLC1O15269 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTLC1O15269 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.51■□□□□ 0.71
SPTLC1O15269 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SPTLC1O15269 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTLC1O15269 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.51■□□□□ 0.71
SPTLC1O15269 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
SPTLC1O15269 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTLC1O15269 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTLC1O15269 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SPTLC1O15269 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC1O15269 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC1O15269 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.5■□□□□ 0.71
SPTLC1O15269 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SPTLC1O15269 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC1O15269 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.5■□□□□ 0.71
SPTLC1O15269 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC1O15269 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC1O15269 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.5■□□□□ 0.71
SPTLC1O15269 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.5■□□□□ 0.71
SPTLC1O15269 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPTLC1O15269 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SPTLC1O15269 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.5■□□□□ 0.71
SPTLC1O15269 AC113404.2-201ENST00000507884 177 ntBASIC19.5■□□□□ 0.71
SPTLC1O15269 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.5■□□□□ 0.71
SPTLC1O15269 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms